Related Experiment Video
Updated: Feb 22, 2026

06:18
Optimized Bone Sampling Protocols for the Retrieval of Ancient DNA from Archaeological Remains
Published on: November 30, 2021
5.2K
Detection of DNA in ancient bones using histochemical methods
F M Guarino1, F Angelini, G Odierna
1Department of Evolutionary and Comparative Biology, University of Naples Federico II, Italy.
Summary
Histochemical techniques successfully detect DNA in ancient Pompeian bone osteocytic lacunae. These methods correlate with histology and DNA extraction success, saving time and cost in ancient DNA studies.
Area of Science:
- Paleogenetics
- Biochemistry
- Forensic Anthropology
Background:
- Ancient bone analysis requires reliable methods for DNA detection.
- Osteocytic lacunae are potential reservoirs for endogenous DNA in fossilized remains.
- Previous techniques for ancient DNA identification in bone matrix were limited.
Observation:
- Histochemical stains, including 4'-6-diamidino-2-phenylindole (DAPI), chromomycin A3 (CMA), and the Feulgen reaction, were applied to ancient human and horse bones from Pompeii.
- Control samples from modern animals were also analyzed.
- Undecalcified, ground, and unstained bone sections were compared with stained sections.
Findings:
- All applied histochemical techniques yielded positive DNA signals within the osteocytic lacunae of ancient bones.
- Results from histochemical staining strongly correlated with histological analysis of bone quality.
- Successful DNA extraction and amplification were consistent with positive histochemical and histological findings.
Implications:
- Conventional DNA-specific histochemical techniques, combined with histological analysis, offer a validated approach for studying ancient bone DNA.
- These methods can improve the efficiency and reduce the cost of ancient DNA research.
- The findings support the utility of these techniques for identifying suitable ancient bone samples for genetic analysis.
Related Concept Videos
Labeling DNA Probes
9.5K
DNA probes are fragments of DNA labeled with a reporter tag to enable their detection or purification. The resulting labeled DNA probes can then hybridize to target nucleic acid sequences through complementary base-pairing, and may be used to recover or identify these regions.
Radioisotopes, fluorophores, or small molecule binding partners like biotin or digoxigenin, are the most widely used reporter tags for labeling DNA probes. These labels can be attached to the probe DNA molecule via...
Radioisotopes, fluorophores, or small molecule binding partners like biotin or digoxigenin, are the most widely used reporter tags for labeling DNA probes. These labels can be attached to the probe DNA molecule via...
9.5K
Karyotyping
69.0K
Overview
69.0K
Southern Blot
23.4K
Agarose gel electrophoresis is very useful in separating DNA fragments by size. Running a DNA ladder containing fragments of the known length alongside the sample helps determine the approximate length of the sample DNA fragments. However, additional steps are needed to verify the sequence identity of the sample DNA fragments.
Denatured DNA fragments must be transferred onto a carrier membrane from the gel to make it accessible to a probe - a small ssDNA fragment complementary to the target DNA...
Denatured DNA fragments must be transferred onto a carrier membrane from the gel to make it accessible to a probe - a small ssDNA fragment complementary to the target DNA...
23.4K
DNA Isolation
45.4K
DNA isolation protocols can be fast and straightforward or complex and time-consuming depending on the type and quality of DNA required for further processing. For example, plasmid DNA extraction is a bit more complicated than genomic DNA extraction because of the need for an appropriate lysis method to separate plasmid DNA from gDNA during isolation. However, for specific applications, such as long-range DNA sequencing that require a good yield of high- quality DNA samples, we need to follow...
45.4K
In-situ Hybridization
10.7K
In situ hybridization (ISH) is a technique used to detect and localize specific DNA or RNA molecules in cells, tissue, or tissue sections using a labeled probe. The technique was first used in 1969 for the investigation of nucleic acids. It is currently an essential tool in scientific research and clinical settings, especially for diagnostic purposes.
Types of probes and labels
A probe is a complementary strand of DNA or RNA that binds to corresponding nucleotide sequences in a cell. Many...
Types of probes and labels
A probe is a complementary strand of DNA or RNA that binds to corresponding nucleotide sequences in a cell. Many...
10.7K
FISH - Fluorescent In-situ Hybridization
24.8K
Fluorescence in situ hybridization, or FISH, was developed in the early 1980s and has quickly become one of the most widely used techniques in cytogenetics. Labeled probes are used to bind complementary DNA or RNA sequences on a chromosome or in a region within a cell. Earlier, the probes could only be obtained by cloning or reverse transcription of a DNA template. Currently, the probe oligonucleotides can be synthesized synthetically. Additionally, with the advancement of optical techniques,...
24.8K

