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A Chromatin Immunoprecipitation Assay to Identify Novel NFAT2 Target Genes in Chronic Lymphocytic Leukemia
Published on: December 4, 2018
Concerted dephosphorylation of the transcription factor NFAT1 induces a conformational switch that regulates
H Okamura1, J Aramburu, C García-Rodríguez
1The Center for Blood Research and Department of Pathology, Harvard Medical School, Boston, Massachusetts 02115, USA.
Abstract:
NFAT transcription factors are highly phosphorylated proteins that are regulated by the calcium-dependent phosphatase calcineurin. We show by mass spectrometry that NFAT1 is phosphorylated on fourteen conserved phosphoserine residues in its regulatory domain, thirteen of which are dephosphorylated upon stimulation. Dephosphorylation of all thirteen residues is required to mask a nuclear export signal (NES), cause full exposure of a nuclear localization signal (NLS), and promote transcriptional activity. An inducible phosphorylation site in the transactivation domain contributes to transcriptional activity. Our data suggest that dephosphorylation promotes NFAT1 activation by increasing the probability of an active conformation, in a manner analogous to that by which depolarization increases the open probability of voltage-gated ion channels. This conformational switch paradigm may explain modification-induced functional changes in other heavily phosphorylated proteins.
Insights
Dephosphorylation of NFAT1 (Nuclear Factor of Activated T-cells) by calcineurin is crucial for its transcriptional activity. This process unmasks key signals, promoting nuclear entry and gene regulation.
Area of Science:
- Molecular Biology
- Cellular Signaling
- Transcription Factor Regulation
Background:
- Nuclear Factor of Activated T-cells (NFAT) proteins are critical transcription factors regulated by calcium signaling.
- These proteins are known to be heavily phosphorylated, influencing their localization and activity.
Purpose of the Study:
- To elucidate the specific phosphorylation sites on NFAT1 and their role in regulating its function.
- To understand the mechanism by which calcineurin-mediated dephosphorylation activates NFAT1.
Main Methods:
- Mass spectrometry was employed to identify and quantify phosphorylation sites on NFAT1.
- Functional assays were conducted to assess the impact of specific dephosphorylation events on NFAT1 localization and transcriptional activity.
Main Results:
- NFAT1 is phosphorylated on fourteen conserved phosphoserine residues within its regulatory domain.
- Dephosphorylation of thirteen of these residues upon stimulation is essential for masking the nuclear export signal (NES) and exposing the nuclear localization signal (NLS).
- An additional inducible phosphorylation site in the transactivation domain also contributes to transcriptional activity.
Conclusions:
- Dephosphorylation acts as a key switch, promoting NFAT1 activation by increasing the probability of an active conformation.
- This mechanism, analogous to ion channel gating, highlights a paradigm for modification-induced functional changes in heavily phosphorylated proteins.
- Understanding NFAT1 regulation provides insights into calcium-mediated gene expression and cellular responses.
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