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Related Experiment Videos

An integrated approach to structural genomics.

U Heinemann1, J Frevert, K Hofmann

  • 1Forschungsgruppe Kristallographie, Max-Delbrück-Centrum für Molekulare Medizin, Robert-Rössle-Strasse 10, 13122, Berlin, Germany. Heinemann@MDC-Berlin.de

Progress in Biophysics and Molecular Biology
|November 7, 2000
PubMed
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Structural genomics aims to map all protein structures for homology modeling. The Protein Structure Factory (PSF) will accelerate this by analyzing human proteins using high-throughput methods.

Area of Science:

  • Biochemistry
  • Structural Biology
  • Genomics

Background:

  • Structural genomics seeks to catalog protein structures for comprehensive biological understanding.
  • Homology modeling relies on a representative set of known protein structures.

Purpose of the Study:

  • To establish a low-cost, high-throughput infrastructure for analyzing soluble human proteins.
  • To contribute to the global effort in structural genomics.

Main Methods:

  • Expression of protein-coding genes in E. coli or yeast.
  • Semi-automated purification of affinity-tagged proteins.
  • Structure determination using X-ray diffraction and NMR spectroscopy.

Main Results:

  • Development of a robotic station for protein crystallization.

Related Experiment Videos

  • Establishment of an NMR center.
  • Creation of a synchrotron-based crystallography facility at BESSY II.
  • Conclusions:

    • The Protein Structure Factory (PSF) will enhance structural genomics efforts.
    • Automation, parallelization, and standardization are key to high-throughput structure analysis.
    • The PSF infrastructure supports comprehensive structural description of the protein universe.