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Detection of Rare Mutations in CtDNA Using Next Generation Sequencing
Published on: August 24, 2017
Fibroblast growth factor receptor-2 mutation analysis in human prostate cancer
P Mehta1, C N Robson, D E Neal
1School of Surgical Sciences, The Medical School, University of Newcastle, Newcastle upon Tyne, UK.
Objective:
To assess whether mutations in the hot-spots of the fibroblast growth factor (FGF) receptor-2 gene (FGFR2, exons encoding the IIIa, IIIb, IIIc and transmembrane domain, TMD) are associated with the development of prostate cancer, as the IIIb variant is the specific receptor for FGF7/KGF, an androgen-inducible paracrine factor regulating prostatic growth. Materials and methods Single-strand conformational polymorphism-polymerase chain reaction (SSCP-PCR) and cycle-sequencing analysis were used to screen FGFR2 mutations in 30 patients with prostate cancer; corresponding blood samples were analysed from 11 of the patients. The human prostate cell lines, LNCaP, PC3, DU145, PNT1A and PNT1B were also examined. In addition, 10 foci of invasive cancer from three patients who underwent radical prostatectomy were also assessed.
Results:
Positive controls containing FGFR2 mutations (Crouzon disease and Pfieffer syndrome) were confirmed by SSCP-PCR and sequencing. Analysis of all prostate tumour samples and prostate-derived cell lines revealed no polymorphisms or mutations in the IIIa, IIIb, IIIc and TMD regions of FGFR2.
Conclusion:
FGFR2 mutations in the-FGF binding domain and the TMD are not frequent events in human prostate cancer.
Insights
Mutations in the fibroblast growth factor receptor-2 (FGFR2) gene are not common in prostate cancer. This study found no FGFR2 mutations in tumor samples or prostate cell lines, suggesting they do not drive cancer development.
Area of Science:
- Genetics
- Oncology
- Molecular Biology
Background:
- Fibroblast Growth Factor Receptor-2 (FGFR2) plays a role in cell growth.
- The IIIb variant of FGFR2 specifically binds FGF7/KGF, an androgen-inducible factor crucial for prostate growth.
- Understanding FGFR2's role may reveal new therapeutic targets for prostate cancer.
Purpose of the Study:
- To investigate the association between mutations in key regions of the FGFR2 gene and prostate cancer development.
- To screen for FGFR2 mutations in prostate tumor samples, adjacent tissues, and cell lines.
Main Methods:
- Screening of FGFR2 gene hot-spots (exons encoding IIIa, IIIb, IIIc, and TMD) using Single-Strand Conformational Polymorphism-Polymerase Chain Reaction (SSCP-PCR) and cycle-sequencing.
- Analysis of 30 prostate cancer patients' tumor samples and 11 blood samples.
- Examination of human prostate cell lines (LNCaP, PC3, DU145, PNT1A, PNT1B) and tumor foci.
Main Results:
- Established positive controls with known FGFR2 mutations confirmed the validity of the SSCP-PCR and sequencing methods.
- No polymorphisms or mutations were detected in the analyzed FGFR2 regions (IIIa, IIIb, IIIc, and TMD) across all examined prostate tumor samples and cell lines.
Conclusions:
- Mutations within the FGF binding domain and Transmembrane Domain (TMD) of FGFR2 are infrequent in human prostate cancer.
- The findings suggest that FGFR2 mutations are not a common driver in the pathogenesis of prostate cancer.
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