Search research articles

ABOUT JoVE

Overview Leadership Blog JoVE Help Center

AUTHORS

Publishing Process Editorial Board Scope & Policies Peer Review FAQ Submit

LIBRARIANS

Testimonials Subscriptions Access Resources Library Advisory Board FAQ

RESEARCH

JoVE Journal Methods Collections JoVE Encyclopedia of Experiments Archive

EDUCATION

JoVE Core JoVE Business JoVE Science Education JoVE Lab Manual Faculty Resource Center Faculty Site

Terms & Conditions of Use

Search research articles

Related Experiment Videos

TRES: comparative promoter sequence analysis.

M V Katti¹, M K Sakharkar, P K Ranjekar

¹Plant Molecular Biology Unit, Division of Biochemical Sciences, National Chemical Laboratory, Pune 411 008, India.

Bioinformatics (Oxford, England)

|December 1, 2000

Summary

This summary is machine-generated.

Related Concept Videos

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by

Same author

Pharmacokinetic study of two sulfamethoxazole-phytochemical antimicrobial conjugates in mice.

Die Pharmazie·2025

Same author

Association of timing of congenital diaphragmatic hernia repair with survival and morbidity for patients not requiring extra-corporeal life support.

Journal of neonatal-perinatal medicine·2022

Same author

Post-graduate exams amidst COVID-19 pandemic: Our experience.

Indian journal of ophthalmology·2020

Same author

Comparison of Fully Automated and Semi-Automated Methods for Species Identification.

Folia biologica·2019

Same author

Characterization of the purified multifunctional cellulase component of Penicillium funiculosum.

Biotechnology letters·2017

Same author

A randomized controlled prospective study to assess the role of subconjunctival bevacizumab in primary pterygium surgery in Indian patients.

Indian journal of ophthalmology·2015

Same journal

Cross-Domain Transfer Learning from Peptides to Metabolites Using a Multi-Property Fine-Tuned LLM.

Bioinformatics (Oxford, England)·2026

Same journal

Biomedical Concept Recognition with Error-aware Negative-enhanced Ranking Framework.

Bioinformatics (Oxford, England)·2026

Same journal

TEDLH: Domain HMMs for sensitive detection of remote homologues.

Bioinformatics (Oxford, England)·2026

Same journal

PLNFGL: Joint Estimation of Multi-Condition Gene Networks from Single-cell RNA-seq Data.

Bioinformatics (Oxford, England)·2026

Same journal

MCFST: Spatial domain identification method based on multi-view graph convolutional network and graph fusion network.

Bioinformatics (Oxford, England)·2026

Same journal

SpaBiT: Enhancing Spatial Transcriptomics Resolution via Bidirectional Attention Transformers.

Bioinformatics (Oxford, England)·2026

See all related articles

This study introduces a new software tool for comparative promoter analysis. It identifies conserved regulatory elements in DNA sequences, aiding in the discovery of gene regulation mechanisms.

Area of Science:

Genomics
Bioinformatics
Computational Biology

Background:

Comparative promoter analysis aids in understanding gene regulation by identifying conserved regulatory modules.
Identifying these conserved elements is crucial for understanding evolutionary relationships and gene expression patterns.

Purpose of the Study:

To develop a software tool that facilitates comparative promoter analysis.
The tool aims to detect conserved transcription factor binding sites, cis-elements, palindromes, and k-tuples within multiple DNA sequences.

Main Methods:

Development of a novel software tool for sequence analysis.
The tool simultaneously analyzes sets of sequences to identify conserved motifs.

Main Results:

Related Experiment Videos

The software successfully detects conserved transcription factor binding sites, cis-elements, palindromes, and k-tuples.
This facilitates the identification of putative regulatory motifs.

Conclusions:

The developed software tool is effective for comparative promoter analysis.
It aids researchers in identifying conserved regulatory elements for further experimental design and investigation into gene regulation.