Related Experiment Video
Updated: Aug 14, 2026
11:45
Preparation of Stable Bicyclic Aziridinium Ions and Their Ring-Opening for the Synthesis of Azaheterocycles
Published on: August 22, 2018
Recognition of amides by new rigid Calix
1Dipartimento di Chimica Organica e Industriale, Universita di Parma, Parco Area delle Scienze 17/A, I-43100, Parma, Italy.
The Journal of Organic Chemistry
|January 10, 2001
Summary
New calix[4]arene hosts with dual binding sites efficiently recognize amides. The rigid cavity and hydrogen-bonding sidearm are crucial for high binding affinity, driven by guest NH groups.
Area of Science:
- Supramolecular Chemistry
- Organic Chemistry
- Molecular Recognition
Background:
- Amide recognition is crucial in biological systems and chemical sensing.
- Designing synthetic receptors with high affinity and selectivity remains a challenge.
- Calix[4]arenes offer a versatile scaffold for host-guest chemistry.
Purpose of the Study:
- To synthesize and characterize novel calix[4]arene-based hosts for amide recognition.
- To investigate the structure-activity relationship governing amide binding.
- To elucidate the role of host rigidity and binding site அமைப்பு in molecular recognition.
Main Methods:
- Synthesis of functionalized calix[4]arene hosts with a rigid cavity and a hydrogen-bonding sidearm.
- Investigation of host-amide interactions using proton nuclear magnetic resonance ((1)H NMR) spectroscopy in CDCl(3).
- Determination of binding constants for various amide guests.
Main Results:
- New calix[4]arene hosts demonstrated efficient binding toward amides (R(1)CONR(2)R(3)).
- Binding constants reached up to 756 M(-1) when an N-phenylureido sidearm was present.
- Host rigidity was identified as the key factor for efficient molecular recognition.
- The presence of NH groups in the amide guest enhanced binding efficiency and selectivity.
Conclusions:
- The designed calix[4]arene hosts exhibit promising capabilities for selective amide recognition.
- The combination of a rigid cavity and specific sidearms is essential for high binding affinity.
- This study highlights the importance of host structural rigidity in molecular recognition processes.
![Solid-phase Synthesis of [4.4] Spirocyclic Oximes](/_next/image?url=https%3A%2F%2Fcloudfront.jove.com%2FCDNSource%2Fteasers%2F58508.jpg&w=3840&q=50)
Related Concept Videos
01:28Structures of Carboxylic Acid Derivatives
Structure of Carboxylic Acid Derivatives
Carboxylic acid derivatives contain an acyl group attached to a heteroatom such as chlorine, oxygen, or nitrogen. The carbonyl carbon and oxygen are both sp2-hybridized with an unhybridized p orbital.
The three sp2 orbitals of the carbonyl carbon form three σ bonds, one each with the carbonyl oxygen, the α carbon, and the heteroatom, whereas the other two sp2 orbitals of the carbonyl oxygen are occupied by the lone pairs. Further, the unhybridized p...
Carboxylic acid derivatives contain an acyl group attached to a heteroatom such as chlorine, oxygen, or nitrogen. The carbonyl carbon and oxygen are both sp2-hybridized with an unhybridized p orbital.
The three sp2 orbitals of the carbonyl carbon form three σ bonds, one each with the carbonyl oxygen, the α carbon, and the heteroatom, whereas the other two sp2 orbitals of the carbonyl oxygen are occupied by the lone pairs. Further, the unhybridized p...
01:29Preparation of Amides
Amides are synthesized by treating carboxylic acids with amines in the presence of dehydrating agents like dicyclohexylcarbodiimide (DCC).
The DCC-promoted synthesis of amides begins with the protonation of DCC by carboxylic acid. The protonation makes it a better acceptor. Next, the addition of carboxylate to the protonated carbodiimide gives a reactive acylating agent.
Subsequently, the amine acts as a nucleophile that attacks the acylating agent to form a tetrahedral intermediate. In the...
The DCC-promoted synthesis of amides begins with the protonation of DCC by carboxylic acid. The protonation makes it a better acceptor. Next, the addition of carboxylate to the protonated carbodiimide gives a reactive acylating agent.
Subsequently, the amine acts as a nucleophile that attacks the acylating agent to form a tetrahedral intermediate. In the...
01:07Preparation of 1° Amines: Hofmann and Curtius Rearrangement Overview
In the presence of an aqueous base and a halogen, primary amides can lose the carbonyl (as carbon dioxide) and undergo rearrangement to form primary amines. This reaction, called the Hofmann rearrangement, can produce primary amines (aryl and alkyl) in high yields without contamination by secondary and tertiary amines.
01:19Amines to Amides: Acylation of Amines
Various carboxylic acid derivatives (such as acid chlorides, esters, and anhydrides) can be used for the acylation of amines to yield amides. The reaction requires two equivalents of amines. The first amine molecule functions as a nucleophile and attacks the carbonyl carbon to produce a tetrahedral intermediate. This is followed by the loss of the leaving group and restoration of the C=O bond.
Next, the second equivalent of amine serves as a Brønsted base and deprotonates the quaternary amide...
Next, the second equivalent of amine serves as a Brønsted base and deprotonates the quaternary amide...
01:11Nomenclature of Carboxylic Acid Derivatives: Amides and Nitriles
Naming Amides
The IUPAC and common names of amides are derived from the parent carboxylic acid, by replacing the suffix “oic acid” and “ic acid,” respectively, with “amide.” In the following example, the IUPAC name ethanamide is derived from ethanoic acid, and the common name, acetamide, is obtained from acetic acid.
The IUPAC and common names of amides are derived from the parent carboxylic acid, by replacing the suffix “oic acid” and “ic acid,” respectively, with “amide.” In the following example, the IUPAC name ethanamide is derived from ethanoic acid, and the common name, acetamide, is obtained from acetic acid.
01:26Preparation of 1° Amines: Hofmann and Curtius Rearrangement Mechanism
The Hofmann and Curtius rearrangement reactions can be applied to synthesize primary amines from carboxylic acid derivatives such as amides and acyl azides. In the Hofmann rearrangement, a primary amide undergoes deprotonation in the presence of a base, followed by halogenation to generate an N-haloamide. A second proton abstraction produces a stabilized anionic species, which rearranges to an isocyanate intermediate via an alkyl group migration from the carbonyl carbon to the neighboring...