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Updated: Sep 17, 2026

From Constructs to Crystals – Towards Structure Determination of β-barrel Outer Membrane Proteins
Published on: July 4, 2016
Structure of the O16 antigen of Stenotrophomonas maltophilia
1Department of Chemistry, Faculty of Science and the Environment, University of Hull, UK.
Abstract:
A polysaccharide containing D-ribose, N-acetyl-D-glucosamine, and N-acetyl-D-mannosamine was isolated from the phenol-soluble lipopolysaccharide extracted from defatted cell walls of the reference strain (560) for serogroup O16 of Stenotrophomonas maltophilia. The results of methylation analysis, chemical degradations, and NMR spectroscopy showed that the polysaccharide is based on a branched trisaccharide repeating-unit of the structure shown below. Although ribose was absent from about half of the units in the isolated polymer, the regularity and spacing of the ladder observed on SDS-PAGE of the parent lipopolysaccharide indicate that this was an artefact of the mild acid hydrolysis used to release the polymer. On the other hand, the effects of mild alkaline hydrolysis on the polymer indicated partial O-acetylation. [structure: see text]
Insights
Researchers characterized a Stenotrophomonas maltophilia O16 lipopolysaccharide polysaccharide. The structure revealed a branched trisaccharide repeating unit containing D-ribose, N-acetyl-D-glucosamine, and N-acetyl-D-mannosamine.
Area of Science:
- Microbiology
- Carbohydrate Chemistry
- Structural Biology
Background:
- Stenotrophomonas maltophilia is an opportunistic pathogen.
- Lipopolysaccharides (LPS) are key components of Gram-negative bacterial cell walls.
- Understanding LPS structure is crucial for serotyping and vaccine development.
Purpose of the Study:
- To elucidate the detailed structure of the polysaccharide component of Stenotrophomonas maltophilia serogroup O16 lipopolysaccharide.
- To characterize the repeating unit and identify constituent monosaccharides.
Main Methods:
- Isolation of phenol-soluble lipopolysaccharide from defatted cell walls.
- Methylation analysis.
- Chemical degradation studies.
- Nuclear Magnetic Resonance (NMR) spectroscopy.
- Sodium Dodecyl Sulfate-Polyacrylamide Gel Electrophoresis (SDS-PAGE).
Main Results:
- A polysaccharide composed of D-ribose, N-acetyl-D-glucosamine, and N-acetyl-D-mannosamine was isolated.
- Structural analysis revealed a branched trisaccharide repeating unit.
- Mild acid hydrolysis led to the apparent absence of ribose in some units, identified as an artifact.
- Partial O-acetylation was indicated by alkaline hydrolysis.
Conclusions:
- The study determined the precise structure of the Stenotrophomonas maltophilia O16 polysaccharide repeating unit.
- The findings contribute to the serological characterization of Stenotrophomonas maltophilia strains.
- Understanding LPS structure aids in developing diagnostic and therapeutic strategies.
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