The physical maps for sequencing human chromosomes 1, 6, 9, 10, 13, 20 and X.
D R Bentley1, P Deloukas, A Dunham
1The Sanger Centre, Hinxton, Cambridge, UK. drb@sanger.ac.uk
Nature
|March 10, 2001
Summary
Researchers mapped eight human chromosomes, covering one-third of the genome. This genome mapping project achieved high coverage of gene-containing regions and specific markers, aiding future sequencing efforts.
Area of Science:
- Genomics
- Molecular Biology
- Human Genetics
Background:
- High-resolution genome maps are crucial for understanding genetic diseases and human evolution.
- Previous mapping efforts have faced challenges in achieving comprehensive coverage and long-range organization.
Purpose of the Study:
- To construct detailed physical maps for eight human chromosomes.
- To establish the long-range organization of these chromosomes early in the mapping process.
- To assess the completeness and accuracy of the generated maps.
Main Methods:
- Construction of landmark maps for eight chromosomes (1, 6, 9, 10, 13, 20, X, and 22).
- Isolation of bacterial clones and assembly of contiguous sequences (contigs).
- Utilizing a localized approach for contig extension and gap closure.
Main Results:
- Generated maps cover over 94% of the euchromatic regions for the studied chromosomes.
- The maps comprise 176 contigs and include 96% of chromosome-specific markers from the human gene map.
- The mapping approach facilitated early establishment of long-range organization and simplified problem-solving.
Conclusions:
- The developed mapping strategy provides a robust framework for large-scale genome sequencing.
- The high-quality maps serve as a valuable resource for genetic research and disease gene identification.
- Measurement of remaining gaps allows for accurate assessment of chromosome length and clone coverage.
Related Concept Videos
Pedigree Analysis
78.8K
Overview
78.8K
Karyotyping
49.3K
Overview
49.3K
X-linked Traits
45.6K
In most mammalian species, females have two X sex chromosomes and males have an X and Y. As a result, mutations on the X chromosome in females may be masked by the presence of a normal allele on the second X. In contrast, a mutation on the X chromosome in males more often causes observable biological defects, as there is no normal X to compensate. Trait variations arising from mutations on the X chromosome are called “X-linked”.
45.6K
Sex-linked Disorders
94.4K
Like autosomes, sex chromosomes contain a variety of genes necessary for normal body function. When a mutation in one of these genes results in biological deficits, the disorder is considered sex-linked.
94.4K
X and Y Chromosomes
16.5K
Among mammals, the gender of an organism is determined by the sex chromosomes. Humans have two sex chromosomes, X and Y. Every human diploid cell has 22 pairs of autosomes and one pair of sex chromosomes. A human female has two X chromosomes, while a male has one X chromosome and one Y chromosome.
The germline cells such as egg and sperm cells carry only half the number of chromosomes, i.e., 22 autosomes and one sex chromosome. All eggs have an X chromosome, while sperm cells can carry an X or...
The germline cells such as egg and sperm cells carry only half the number of chromosomes, i.e., 22 autosomes and one sex chromosome. All eggs have an X chromosome, while sperm cells can carry an X or...
16.5K
The Ratio of X Chromosome to Autosomes
11.5K
In most organisms, sex is determined by the ratio of X and Y chromosomes. However, in some organisms, such as Drosophila and C.elegans, sex is determined by the ratio of the number of X chromosomes to the number of sets of autosomes. The Y chromosome in Drosophila is active but does not determine sex. It contains genes responsible for the production of sperms in adult flies.
Normal male Drosophila has a ratio of one X chromosome to two sets of autosomes. In contrast, normal female...
Normal male Drosophila has a ratio of one X chromosome to two sets of autosomes. In contrast, normal female...
11.5K


