Crystal structure of the atypical protein kinase domain of a TRP channel with phosphotransferase activity
H Yamaguchi1, M Matsushita, A C Nairn
1Howard Hughes Medical Institute, New York, NY 10021, USA.
Abstract:
Transient receptor potential (TRP) channels modulate calcium levels in eukaryotic cells in response to external signals. A novel transient receptor potential channel has the ability to phosphorylate itself and other proteins on serine and threonine residues. The catalytic domain of this channel kinase has no detectable sequence similarity to classical eukaryotic protein kinases and is essential for channel function. The structure of the kinase domain, reported here, reveals unexpected similarity to eukaryotic protein kinases in the catalytic core as well as to metabolic enzymes with ATP-grasp domains. The inclusion of the channel kinase catalytic domain within the eukaryotic protein kinase superfamily indicates a significantly wider distribution for this group of signaling proteins than suggested previously by sequence comparisons alone.
Insights
A novel calcium-modulating channel protein kinase was discovered. Its unique structure reveals unexpected similarities to known protein kinases, expanding the known signaling protein families.
Area of Science:
- Biochemistry
- Molecular Biology
- Cell Signaling
Background:
- Transient receptor potential (TRP) channels are crucial for regulating intracellular calcium levels in response to external stimuli.
- Calcium signaling plays a vital role in numerous cellular processes.
- The diversity of TRP channels and their regulatory mechanisms are areas of active research.
Purpose of the Study:
- To characterize a novel transient receptor potential channel with intrinsic kinase activity.
- To elucidate the structural and evolutionary relationship of this channel's catalytic domain to known protein kinases.
- To understand the functional significance of the kinase domain in channel activity.
Main Methods:
- X-ray crystallography was employed to determine the three-dimensional structure of the kinase domain.
- Bioinformatic analyses were performed to compare the kinase domain's sequence and structure with existing protein kinase and enzyme databases.
- Functional assays were conducted to assess the necessity of the kinase domain for channel function.
Main Results:
- A novel TRP channel was identified with autophosphorylation and transphosphorylation capabilities on serine and threonine residues.
- The catalytic domain of this channel kinase exhibits no significant sequence homology to classical eukaryotic protein kinases.
- Structural analysis revealed unexpected similarities in the catalytic core to eukaryotic protein kinases and to metabolic enzymes possessing ATP-grasp domains.
- The kinase domain was found to be essential for the channel's overall function.
Conclusions:
- The discovery of a TRP channel with intrinsic, structurally unique kinase activity expands the known repertoire of calcium-modulating proteins.
- The structural and evolutionary links identified suggest a broader distribution of the eukaryotic protein kinase superfamily than previously recognized.
- This finding has significant implications for understanding calcium signaling pathways and the evolution of protein kinases.
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