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Updated: Oct 7, 2026

RNAscope for In situ Detection of Transcriptionally Active Human Papillomavirus in Head and Neck Squamous Cell Carcinoma
Published on: March 11, 2014
Identification of differentially expressed genes in human papillomavirus type-16 infected oral cancer cells
J J Brown1, M Qin, L William-Smith
1Department of Otolaryngology-Head and Neck Surgery, Charles R. Drew University of Medicine and Science, 1731 East 120th St., Los Angeles, CA 90059, USA.
Objective:
The goal of this study was to determine the genes required for head and neck cancer development.
Study Design And Setting:
Differential mRNA display analysis was performed using human papillomavirus Type-16 infected immortalized human oral keratinocytes (HOK-16B) and its benzo(a)pyrene-exposed tumorigenic derivative (HOK-16B-BaP-T).
Results:
Twenty-one differentially expressed cDNA clones were identified between the 2 cell lines. Clone 4 with no known homology showed lower expression in tumorigenic cells compared with either normal or immortalized oral keratinocytes. Clone 6 expression was elevated in several head and neck cancer cells, in addition to Burkitt's lymphoma Raji harboring latent Epstein-Barr virus.
Conclusion:
These findings suggested that clone 6 may be involved in the oncogenic transformation whereas clone 4 may potentially function as a tumor suppressor gene.
Significance:
Differential mRNA analysis using the in vitro oral carcinogenesis model may help to identify important genetic markers for the early detection and progression of head and neck cancer.
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