Related Experiment Video

Updated: Aug 19, 2026

In Situ Characterization of Shewanella oneidensis MR1 Biofilms by SALVI and ToF-SIMS
09:56

In Situ Characterization of Shewanella oneidensis MR1 Biofilms by SALVI and ToF-SIMS

Published on: August 18, 2017

Shewanella japonica sp. nov

E P Ivanova, T Sawabe, N M Gorshkova

    International Journal of Systematic and Evolutionary Microbiology
    |June 20, 2001
    PubMed

    Abstract:

    Two strains of agar-digesting bacteria, KMM 3299T and KMM 3300, respectively isolated from sea water and the mussel Protothaca jedoensis, have been characterized. Based on sequencing of the 16S rRNA gene, KMM 3299T showed the highest similarity (93-95%) to members of the genus Shewanella. The G+C contents of the DNAs of these strains were 43-44 mol%. The level of DNA homology between the two strains was conspecific (95%), indicating that they represent a distinct genospecies. These organisms were non-pigmented, Gram-negative, polarly flagellated, facultatively anaerobic, mesophilic, neutrophilic and able to degrade a wide range of high molecular mass polymers, including alginate, carrageenan, laminaran and agar. The novel organisms were susceptible to gentamycin, carbenicillin, lincomycin and oleandomycin. The predominant cellular fatty acids were i-15:0, 16:0, 16:1(n-7), 18:1(n-7). Eicosapentaenoic acid, 20:5(n-3), was detected in the two isolates at levels of 1-8%, depending on the temperature of cultivation. Phylogenetic evidence, together with phenotypic characteristics, showed that the two isolates studied constitute a novel species of the genus Shewanella. The name Shewanella japonica is proposed; the type strain is KMM 3299T(= LMG 19691T = CIP 106860T).

    More Related Videos

    A High-throughput Platform for the Screening of Salmonella spp./Shigella spp.
    06:55

    A High-throughput Platform for the Screening of Salmonella spp./Shigella spp.

    Published on: November 7, 2018

    Application of the Intelligent High-Throughput Antimicrobial Sensitivity Testing/Phage Screening System and Lar Index of Antimicrobial Resistance
    09:59

    Application of the Intelligent High-Throughput Antimicrobial Sensitivity Testing/Phage Screening System and Lar Index of Antimicrobial Resistance

    Published on: July 21, 2023

    Related Experiment Videos

    Last Updated: Aug 19, 2026

    In Situ Characterization of Shewanella oneidensis MR1 Biofilms by SALVI and ToF-SIMS
    09:56

    In Situ Characterization of Shewanella oneidensis MR1 Biofilms by SALVI and ToF-SIMS

    Published on: August 18, 2017

    A High-throughput Platform for the Screening of Salmonella spp./Shigella spp.
    06:55

    A High-throughput Platform for the Screening of Salmonella spp./Shigella spp.

    Published on: November 7, 2018

    Application of the Intelligent High-Throughput Antimicrobial Sensitivity Testing/Phage Screening System and Lar Index of Antimicrobial Resistance
    09:59

    Application of the Intelligent High-Throughput Antimicrobial Sensitivity Testing/Phage Screening System and Lar Index of Antimicrobial Resistance

    Published on: July 21, 2023

    Related Concept Videos

    Antibiotic Selection00:57

    Antibiotic Selection

    Overview
    Deep Sea Microbial Ecology01:18

    Deep Sea Microbial Ecology

    The deep ocean and its underlying sediments represent vast, largely unexplored microbial habitats that extend far beyond the sunlit photic zone. The photic (euphotic) zone typically spans the upper ~100–200 meters of pelagic waters in the open ocean, but its depth varies geographically and seasonally, where sufficient light supports photosynthetic life. Below this lies the deep sea, spanning roughly 1000–6000 meters (bathypelagic to abyssal zones), with deeper hadal trenches extending beyond...
    Bacterial Gastroenteritis01:18

    Bacterial Gastroenteritis

    Bacterial gastroenteritis, characterized by diarrhea, abdominal cramps, and vomiting, is often caused by ingestion of contaminated food or water and is frequently associated with pathogenic Escherichia coli strains. These microbes exploit two principal mechanisms to inflict disease.Shiga toxin–producing E. coli, also referred to as STEC—notably O157:H7—release Shiga toxins that target ribosomes, blocking protein synthesis. The B subunit of the toxin binds the host glycolipid receptor...

    Articles linked to this work by shared authors, journal, and citation graph.

    Investigating the Mechanism of Intravascular Bubble Formation in Designed Arrays of Vascularized Systems on a Chip.

    Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference·2023

    Properties of Cosmic-Ray Sulfur and Determination of the Composition of Primary Cosmic-Ray Carbon, Neon, Magnesium, and Sulfur: Ten-Year Results from the Alpha Magnetic Spectrometer.

    Physical review letters·2023

    Temporal Structures in Electron Spectra and Charge Sign Effects in Galactic Cosmic Rays.

    Physical review letters·2023

    Properties of Daily Helium Fluxes.

    Physical review letters·2022

    Periodicities in the Daily Proton Fluxes from 2011 to 2019 Measured by the Alpha Magnetic Spectrometer on the International Space Station from 1 to 100 GV.

    Physical review letters·2022

    Erratum: Properties of a New Group of Cosmic Nuclei: Results from the Alpha Magnetic Spectrometer on Sodium, Aluminum, and Nitrogen [Phys. Rev. Lett. 127, 021101 (2021)].

    Physical review letters·2021

    Komagataeibacter ossonobensis sp. nov., a novel bacterial cellulose producer isolated from an artisanal Mediterranean acetification.

    International journal of systematic and evolutionary microbiology·2026

    Delineation of Paraburkholderia tuberum and description of Paraburkholderia lebeckiae sp. nov. isolated from the root nodules of South African Lebeckia ambigua.

    International journal of systematic and evolutionary microbiology·2026

    Actinopolyspora sabaoui sp. nov., a novel halophilic actinobacterium isolated from Ghardaïa soil, Algeria.

    International journal of systematic and evolutionary microbiology·2026

    Haloleucobacter ellipsoideus gen. nov., sp. nov., and Haloleucobacter albus sp. nov., two novel N2-fixing hydrogen bacteria isolated from soil near a wastewater treatment plant.

    International journal of systematic and evolutionary microbiology·2026

    Buttiauxella cochleicola sp. nov., a novel coliform bacterium with β-d-glucuronidase activity, isolated from gastropods and drinking water.

    International journal of systematic and evolutionary microbiology·2026

    Description of Bernardella vulneris gen. nov., sp. nov., assignable to the family Aerococcaceae, isolated from human clinical samples.

    International journal of systematic and evolutionary microbiology·2026

    Optimizing culture-free approaches to recover high-quality Mycobacterium tuberculosis genomic variation.

    Microbial genomics·2026

    Metagenome-assembled genomes for N2-fixing cyanobacterium Nostoc sp. TISTR 8405 and co-occurring microorganisms from a long-term laboratory culture.

    Microbiology resource announcements·2026

    Draft genome sequence of Staphylococcus epidermidis strain UMP2601 isolated from environmental water.

    Microbiology resource announcements·2026

    Daptomycin Overcomes Listeria monocytogenes Persister Cells Through Strain-Dependent Efficacy and clpP-Mediated Stress Response.

    Infection and drug resistance·2026

    Comparative Genomics-Based Evaluation of Lacticaseibacillus rhamnosus KFOM 0134 as a Probiotic against Staphylococcus aureus.

    Journal of microbiology and biotechnology·2026

    Joint-RPCA: domain-aware multi-omics integration for systems microbiology.

    Molecular systems biology·2026
    See all related articles
    JoVE
    x logofacebook logolinkedin logoyoutube logo
    ABOUT JoVE
    OverviewLeadershipBlogJoVE Help Center
    AUTHORS
    Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
    LIBRARIANS
    TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
    RESEARCH
    JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
    EDUCATION
    JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
    Terms & Conditions of Use
    Privacy Policy
    Policies
    Jove
    Visualize
    Contact Us