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Updated: Jul 11, 2026

Assessment of Submitochondrial Protein Localization in Budding Yeast Saccharomyces cerevisiae
Published on: July 19, 2021
Peripheral mitochondrial inner membrane protein, Mss2p, required for export of the mitochondrially coded Cox2p C tail
S A Broadley1, C M Demlow, T D Fox
1Department of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853, USA.
Abstract:
Cytochrome oxidase subunit 2 (Cox2p) is synthesized on the matrix side of the mitochondrial inner membrane, and its N- and C-terminal domains are exported across the inner membrane by distinct mechanisms. The Saccharomyces cerevisiae nuclear gene MSS2 was previously shown to be necessary for Cox2p accumulation. We have used pulse-labeling studies and the expression of the ARG8(m) reporter at the COX2 locus in an mss2 mutant to demonstrate that Mss2p is not required for Cox2p synthesis but rather for its accumulation. Mutational inactivation of the proteolytic function of the matrix-localized Yta10p (Afg3p) AAA-protease partially stabilizes Cox2p in an mss2 mutant but does not restore assembly of cytochrome oxidase. In the absence of Mss2p, the Cox2p N terminus is exported, but Cox2p C-terminal export and assembly of Cox2p into cytochrome oxidase is blocked. Epitope-tagged Mss2p is tightly, but peripherally, associated with the inner membrane and protected by it from externally added proteases. Taken together, these data indicate that Mss2p plays a role in recognizing the Cox2p C tail in the matrix and promoting its export.
Insights
Mss2p is crucial for cytochrome oxidase subunit 2 (Cox2p) accumulation in yeast mitochondria, not synthesis. It facilitates Cox2p C-terminal export, essential for cytochrome oxidase assembly.
Area of Science:
- Mitochondrial biology
- Protein transport
- Molecular genetics
Background:
- Cytochrome oxidase subunit 2 (Cox2p) biogenesis involves matrix-side synthesis and inner membrane export.
- The Saccharomyces cerevisiae gene MSS2 is known to be essential for Cox2p accumulation.
Purpose of the Study:
- To elucidate the precise role of Mss2p in Cox2p biogenesis.
- To determine if Mss2p is involved in Cox2p synthesis or post-synthesis processing and export.
Main Methods:
- Pulse-labeling studies to assess Cox2p synthesis rates.
- Expression of ARG8(m) reporter in COX2 locus of mss2 mutants.
- Analysis of Cox2p stability and assembly in wild-type and mutant strains.
- Investigating the effect of Yta10p (Afg3p) protease inactivation on Cox2p.
Main Results:
- Mss2p is required for Cox2p accumulation, not its synthesis.
- In mss2 mutants, Cox2p C-terminal export and subsequent assembly into cytochrome oxidase are blocked.
- Partial stabilization of Cox2p occurs in mss2 mutants with inactivated Yta10p (Afg3p) AAA-protease, but assembly is not restored.
- Mss2p is peripherally associated with the inner mitochondrial membrane.
Conclusions:
- Mss2p functions in recognizing and promoting the export of the Cox2p C-terminal tail from the mitochondrial matrix.
- Mss2p is essential for the proper assembly of cytochrome oxidase by facilitating Cox2p C-terminal export.
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