Sharpening spots: correcting for bleedover in cDNA array images
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Updated: Sep 30, 2026

Analysis of Histone Antibody Specificity with Peptide Microarrays
Published on: August 1, 2017
Terry Therneau1, Renee C Tschumper, Diane Jelinek
1Department of Health Sciences Research, Mayo Foundation, Rochester, MN 55905, USA. therneau.terry@mayo.edu
Abstract:
For cDNA array methods that depend on imaging of a radiolabel, we show that bleedover of one spot onto another, due to the gap between the array and the imaging media, can be a major problem. The images can be sharpened, however, using a blind convolution method based on the EM algorithm. The sharpened images look like a set of donuts, which concurs with our knowledge of the spotting process. Oversharpened images are actually useful as well, in locating the centers of each spot.

