Proteome database of hepatocellular carcinoma
Rosa C M Y Liang1, Jason C H Neo, Siaw Ling Lo
1Bioprocessing Technology Centre, Singapore, Singapore.
Summary
Hepatocellular carcinoma (HCC) is a common liver cancer. This study updates a proteome database for HCC-M cell lines to aid in discovering diagnostic markers and therapeutic targets for early detection and treatment.
Area of Science:
- Oncology
- Proteomics
- Hepatology
Background:
- Hepatocellular carcinoma (HCC), or hepatoma, is the most prevalent primary liver cancer globally.
- Persistent hepatitis B or C viral infections are major causes of HCC, leading to approximately one million deaths annually, with increasing incidence in developed nations.
- Late presentation and unsuitability for curative treatment result in rare long-term survival for most HCC patients.
Purpose of the Study:
- To identify novel diagnostic markers for early HCC detection.
- To discover tumor-specific associated proteins as potential therapeutic targets for HCC treatment.
- To facilitate the screening and discovery of HCC proteins through proteome analysis.
Main Methods:
- Proteome analysis of HCC cell lines and liver tumor tissues.
- Development and updating of a two-dimensional electrophoresis proteome database.
- Making the HCC-M cell line proteome database accessible via the World Wide Web.
Main Results:
- An updated two-dimensional electrophoresis proteome database for the HCC-M cell line has been generated.
- The HCC-M proteome database is now publicly accessible online.
- This resource supports the ongoing search for HCC diagnostic and therapeutic targets.
Conclusions:
- Proteome databases are crucial for identifying novel HCC biomarkers and therapeutic targets.
- Accessible proteomic data accelerates research into early detection and treatment of hepatocellular carcinoma.
- The HCC-M proteome database provides a valuable resource for the scientific community studying liver cancer.
Related Concept Videos
Proteomics
A proteome is the entire set of proteins that a cell type produces. We can study proteomes using the knowledge of genomes because genes code for mRNAs, and the mRNAs encode proteins. Although mRNA analysis is a step in the right direction, not all mRNAs are translated into proteins.
Proteomics is the study of proteomes' function. It involves the large-scale systematic study of the proteome to denote the protein complement expressed by a genome. Scientist Mark Wilkins coined the term proteomics...
Proteomics is the study of proteomes' function. It involves the large-scale systematic study of the proteome to denote the protein complement expressed by a genome. Scientist Mark Wilkins coined the term proteomics...
Hepatic Portal System
The hepatic portal system, a critical part of our circulatory framework, transports nutrient-laden, deoxygenated blood from the gastrointestinal tract and spleen to the liver. This ingenious system plays an indispensable role in maintaining our body's metabolic equilibrium.
At its core, the hepatic portal vein is the result of a confluence of the superior and inferior mesenteric veins along with the splenic vein. Each of these veins has a unique role. The superior mesenteric vein is responsible...
At its core, the hepatic portal vein is the result of a confluence of the superior and inferior mesenteric veins along with the splenic vein. Each of these veins has a unique role. The superior mesenteric vein is responsible...


