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Updated: Sep 29, 2026

Methyl-binding DNA capture Sequencing for Patient Tissues
Published on: October 31, 2016
Frequent hypermethylation of the RASSF1A gene in prostate cancer
Limin Liu1, Jung-Hoon Yoon, Reinhard Dammann
1Department of Biology, Beckman Research Institute, City of Hope Cancer Center, Duarte, California, CA 91010, USA.
Abstract:
Recently, we have cloned and characterized the Ras association domain family 1A gene (RASSF1A) at 3p21.3, from which loss of genetic material is one of the most frequent events in several types of human solid tumors. The CpG island promoter region of this gene is highly methylated in several human cancers, most notably in small cell lung cancer, breast cancer, and renal cell carcinoma. In this study, we have analysed the methylation status of RASSF1A in primary prostate tumors and in the prostate cancer cell line LNCaP. In total, 37 out of 52 tumors (71%) were methylated at the promoter region of RASSF1A. The relative frequency of methylation was higher in more aggressive tumors compared with less malignant tumors. For instance, tumors with a Gleason score of 7-10 (25 out of 30, 83%) were significantly more methylated compared with Gleason 4-6 tumors (11 out of 20, 55%, P=0.032, Fisher's exact test). Coincident with a hypermethylated promoter, transcripts of RASSF1A were missing in LNCaP cells. Expression of RASSF1A was restored with 5-aza-2'-deoxycytidine, a DNA methylation inhibitor. In conclusion, our data suggest that epigenetic inactivation of RASSF1A by methylation is a very common event in prostate cancer and might be involved in the progression of the disease. Testing for RASSF1A methylation should become useful in prostate cancer early detection and diagnosis and might aid prognosis by gauging the potential status of progression.
Insights
Epigenetic silencing of the RASSF1A gene through promoter methylation is common in prostate cancer. This RASSF1A gene methylation is linked to tumor aggressiveness and may play a role in disease progression.
Area of Science:
- Oncology
- Epigenetics
- Molecular Biology
Background:
- Ras association domain family 1A gene (RASSF1A) is frequently lost in human solid tumors.
- RASSF1A promoter hypermethylation is observed in various cancers, including lung, breast, and renal cell carcinoma.
Purpose of the Study:
- To investigate the methylation status of RASSF1A in prostate tumors and cell lines.
- To determine the correlation between RASSF1A methylation and prostate cancer aggressiveness.
Main Methods:
- Analysis of RASSF1A promoter methylation in 52 primary prostate tumors and the LNCaP cell line.
- Correlation analysis between methylation frequency and Gleason scores.
- Assessment of RASSF1A expression restoration using 5-aza-2'-deoxycytidine.
Main Results:
- RASSF1A promoter methylation was detected in 71% (37/52) of primary prostate tumors.
- Higher methylation frequency was observed in aggressive tumors (Gleason score 7-10) compared to less malignant ones (Gleason score 4-6).
- RASSF1A transcripts were absent in LNCaP cells with a hypermethylated promoter, and expression was restored upon treatment with a DNA methylation inhibitor.
Conclusions:
- Epigenetic inactivation of RASSF1A via promoter methylation is a frequent event in prostate cancer.
- RASSF1A methylation may contribute to prostate cancer progression.
- RASSF1A methylation status could be a valuable biomarker for early detection, diagnosis, and prognosis in prostate cancer.
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