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Updated: Jul 14, 2026

A Comprehensive Protocol for Manual Segmentation of the Medial Temporal Lobe Structures
Published on: July 2, 2014
Volumetric measurement of the hippocampus, the anterior cingulate cortex, and the retrosplenial granular cortex of
1Center for Brain Health, Neuroimaging Laboratory, NYU School of Medicine, New York, NY 10016, USA. oliver.wolf@uni-duesseldorf.de
Abstract:
MRI imaging of the rodent brain is a rapidly growing field in the neurosciences. Relatively limited information is available for regional volume determination. The present paper describes a reliable method for the assessment of the hippocampus, the anterior cingulate cortex, the retrosplenial granular cortex and the ventricles in rats. MRI scans were acquired using a 7 T magnet. The anatomical sampling method was found to be highly reliable with an intra-rater reliability of greater than 0.93. The current protocol should facilitate future in vivo neuroimaging research using animal models of neurodegenerative diseases.
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