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Updated: Aug 6, 2026

A Protocol for Analyzing Hepatitis C Virus Replication
Published on: June 26, 2014
Physical interaction between hepatitis C virus NS4B protein and CREB-RP/ATF6beta
Wen Yan Tong1, Motoko Nagano-Fujii, Rachmat Hidajat
1Division of Microbiology, Kobe University Graduate School of Medicine, 7-5-1 Kusunoki-cho, Chuo-ku, Kobe, Japan.
Hepatitis C virus NS4B protein interacts with cellular transcription factors cyclic AMP-response-element-binding protein-related protein (CREB-RP) and activating transcription factor 6beta (ATF6beta). This interaction suggests NS4B may modulate cellular responses to endoplasmic reticulum stress.
Area of Science:
- Virology
- Molecular Biology
- Cellular Biology
Background:
- Hepatitis C virus (HCV) infection poses a significant global health challenge.
- Understanding host-pathogen interactions is crucial for developing antiviral strategies.
- Endoplasmic reticulum (ER) stress is implicated in viral pathogenesis.
Purpose of the Study:
- To identify cellular proteins interacting with the HCV NS4B protein.
- To investigate the functional implications of the NS4B-host protein interaction in the context of ER stress.
Main Methods:
- Yeast two-hybrid assay to screen for interacting proteins.
- Co-immunoprecipitation and confocal microscopy in mammalian cells to confirm interactions.
- Analysis of specific protein domains involved in the interaction.
Main Results:
- CREB-RP/ATF6beta was identified as a binding partner of HCV NS4B.
- The N-terminal half of NS4B and the bZIP domain of CREB-RP/ATF6beta mediate the interaction.
- Interaction was confirmed in mammalian cells.
- ATF6alpha also interacted with NS4B, though less strongly.
Conclusions:
- HCV NS4B physically interacts with ER stress-induced transcription factors CREB-RP/ATF6beta and ATF6alpha.
- NS4B may modulate cellular responses to ER stress via these interactions.
- This interaction offers a potential target for therapeutic intervention against HCV.
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