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Updated: Sep 27, 2026

Evaluation of Protein–Protein Interactions using an On-Membrane Digestion Technique
Published on: July 19, 2019
Proprotein interaction with the GPI transamidase
Rui Chen1, Vernon Anderson, Yukio Hiroi
1Institute of Pathology, Case Western Reserve University, Cleveland, Ohio 44106, USA.
Abstract:
For characterizing how the glycosylphosphatidylinositol (GPI) transamidase complex functions, we exploited a two-step miniPLAP (placental alkaline phosphatase) in vitro translation system. With this system, rough microsomal membranes (RM) containing either [(35)S]-labeled Gaa1p or epitope-tagged Gpi8p, alternative components of the enzymatic complex, were first prepared. In a second translation, unmodified or mutant miniPLAP mRNA was used such that [(35)S]-labeled native or variant miniPLAP nascent protein was introduced. Following this, the RM were solubilized and anti-PLAP or anti-epitope immunoprecipitates were analyzed. With transamidase competent HeLa cell RM, anti-PLAP or anti-epitope antibody coprecipitated both Gaa1p and Gpi8p consistent with the assembly of the proprotein into a Gaa1p:Gpi8p-containing complex. When RM from K562 mutant K cells which lack Gpi8p were used, anti-PLAP antibody coprecipitated Gaa1p. The proprotein coprecipitation of Gaa1p increased with a nonpermissive GPI anchor addition (omega) site. In contrast, if a miniPLAP mutant devoid of its C-terminal signal was used, no coprecipitation occurred. During the transamidation reaction, a transient high Mr band forms. To definitively characterize this product, RM from K cells transfected with FLAG-tagged GPI8 were employed. Western blots of anti-FLAG bead isolates of solubilized RM from the cells showed that the high Mr band corresponded to Gpi8p covalently bound to miniPLAP. Loss of the band following hydrazinolysis demonstrated that the two components were associated in a thioester linkage. The data indicate that recognition of the proprotein involves Gaa1p, that the interaction with the complex does not depend on a permissive omega site, and that Gpi8p forms a thioester intermediate with the proprotein. The method could be useful for rapid analysis of nascent protein interactions with transamidase components, and possibly for helping to prepare a functional in vitro transamidase system.
Insights
This study reveals how the glycosylphosphatidylinositol (GPI) transamidase complex functions. The Gpi8p subunit forms a thioester intermediate with the proprotein during GPI anchor addition.
Area of Science:
- Biochemistry
- Molecular Biology
- Cell Biology
Background:
- The glycosylphosphatidylinositol (GPI) transamidase complex is essential for attaching GPI anchors to proteins.
- Understanding the complex's mechanism is crucial for deciphering protein trafficking and function.
- Previous studies have identified key components but the precise mechanism of action remains unclear.
Purpose of the Study:
- To elucidate the functional mechanism of the GPI transamidase complex.
- To characterize the interaction between the proprotein and the transamidase complex.
- To identify intermediates formed during the transamidation reaction.
Main Methods:
- Development of a two-step miniPLAP (placental alkaline phosphatase) in vitro translation system.
- Preparation of rough microsomal membranes (RM) with labeled Gaa1p or Gpi8p.
- Analysis of immunoprecipitates and Western blots to identify protein interactions and intermediates.
Main Results:
- Gaa1p and Gpi8p co-precipitated with miniPLAP in a transamidase-competent complex.
- Gpi8p was identified as covalently bound to miniPLAP, forming a transient high molecular weight band.
- Hydrazinolysis confirmed a thioester linkage between Gpi8p and miniPLAP, indicating a thioester intermediate.
Conclusions:
- Proprotein recognition involves Gaa1p, independent of the omega site permissiveness.
- Gpi8p forms a crucial thioester intermediate with the proprotein during transamidation.
- The developed in vitro system offers a valuable tool for studying nascent protein interactions with the transamidase complex.
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