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Absence of R24C mutation of the CDK4 gene in leukemias and solid tumors
Naoki Mori1, Rong Yang, Norihiko Kawamata
1Department of Medicine, Division of Hematology and Oncology, Cedars-Sinai Medical Center, UCLA School of Medicine, Los Angeles, California, USA. mori@dh.twmu.ac.jp
Abstract:
A mutation of the p16(INK4a)-binding domain of the cyclin dependent kinase 4 (CDK4) gene, R24C, has been reported in some cases of melanoma. This mutation prevented binding of the CDK4 inhibitor p16(INK48) to CDK4. To determine the relevance of the mutation, we performed polymerase chain reaction-single-strand conformation polymorphism (PCR-SSCP) analysis in diverse types of human leukemias and solid tumors. No mobility shifts indicating sequence alterations were observed in 273 tumors and 49 cell lines from diverse kinds of tumors These results suggest that in contrast to melanoma, in many other types of human neoplasms the mutation of the CDK4 gene is very rare. To better understand these findings, we randomly mutagenized the CDK4 gene and used the yeast two-hybrid method to screen for CDK4 mutants that had lost the ability to bind to p16(INK4a). Sequence analysis and in vitro kinase assays showed that most of the mutations that disrupted interactions with p16(INK4) also knocked out the activity of CDK4. This result may explain the rareness of CDK4 mutations in human tumors.
Insights
The R24C mutation in the cyclin-dependent kinase 4 (CDK4) gene, linked to melanoma, was not found in most other human cancers. This suggests CDK4 mutations are rare in neoplasms due to functional loss.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- The R24C mutation in the cyclin-dependent kinase 4 (CDK4) gene affects p16(INK4a) binding.
- This mutation has been observed in some melanoma cases.
Purpose of the Study:
- To investigate the prevalence of the CDK4 R24C mutation in various human tumors.
- To understand why CDK4 mutations might be rare in non-melanoma cancers.
Main Methods:
- Polymerase chain reaction-single-strand conformation polymorphism (PCR-SSCP) analysis of 273 tumors and 49 cell lines.
- Yeast two-hybrid screening of randomly mutagenized CDK4.
- Sequence analysis and in vitro kinase assays.
Main Results:
- No CDK4 R24C mutations were detected in the analyzed leukemias and solid tumors.
- Most randomly generated CDK4 mutations disrupting p16(INK4a) binding also abolished CDK4 kinase activity.
Conclusions:
- The CDK4 R24C mutation is rare in most human neoplasms, unlike in melanoma.
- The loss of CDK4 activity associated with p16(INK4a) binding disruption likely explains the rarity of these mutations in cancer.
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