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Molecular sensing by pyrene excimer signal of fluorescent DNA aptamer

Yusuke Ohtani1, Kazushige Yamana, Hidehiko Nakano

  • 1Department of Applied Chemistry, Himeji Institute of Technology, 2167 Shosha, Himeji 671-2201, Japan.

Nucleic Acids Research. Supplement (2001)
|August 9, 2003
PubMed

Abstract:

The pyrene excimer label (2) has been incorporated into the adjacent residue to the binding site of anti-ATP DNA aptamer. The fluorescent aptamer exhibited the specific fluorescence signal only in the presence of ATP.

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DNA probes are fragments of DNA labeled with a reporter tag to enable their detection or purification. The resulting labeled DNA probes can then hybridize to target nucleic acid sequences through complementary base-pairing, and may be used to recover or identify these regions.
Radioisotopes, fluorophores, or small molecule binding partners like biotin or digoxigenin, are the most widely used reporter tags for labeling DNA probes. These labels can be attached to the probe DNA molecule via...

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