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Investigating Protein Sequence-structure-dynamics Relationships with Bio3D-web
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Published on: July 16, 2017

Protein conformational dynamics probed by single-molecule electron transfer.

Haw Yang1, Guobin Luo, Pallop Karnchanaphanurach

  • 1Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA 02138, USA.

Science (New York, N.Y.)
|October 11, 2003
PubMed
Summary
This summary is machine-generated.

Researchers used electron transfer in single protein molecules to observe angstrom-scale structural changes. This revealed protein conformational fluctuations linked to catalytic reactivity.

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Area of Science:

  • Biophysics
  • Protein dynamics
  • Electron transfer

Background:

  • Electron transfer serves as a sensitive probe for angstrom-scale structural dynamics in single protein molecules.
  • Flavin reductases utilize flavin and tyrosine residues where photo-induced electron transfer can occur.

Purpose of the Study:

  • To investigate angstrom-scale structural changes in single protein molecules using electron transfer as a probe.
  • To correlate protein conformational fluctuations with catalytic reactivity.

Main Methods:

  • Utilized single-molecule fluorescence lifetime measurements of flavin.
  • Employed photo-induced electron transfer between flavin and tyrosine as a distance probe.
  • Performed correlation analysis on observed distance variations.

Main Results:

  • Observed variations in flavin-tyrosine distance over time at the single-molecule level.
  • Determined the potential of mean force between flavin and tyrosine.
  • Revealed conformational fluctuations across multiple timescales (microseconds to seconds).

Conclusions:

  • Single-molecule electron transfer can resolve angstrom-scale protein structural dynamics.
  • Protein conformational fluctuations are linked to changes in catalytic reactivity.
  • The existence of multiple interconverting conformers influences enzyme function.