Related Experiment Video
Updated: Aug 30, 2026

Long-Read Plasmid Sequencing and Assembly Using Nanopore Sequencing-Based Workflows
Published on: July 7, 2026
Megaplasmids in Gram-negative, moderately halophilic bacteria
Montserrat Argandoña1, Fernando Martínez-Checa, Inmaculada Llamas
1Departamento de Microbiologi;a, Facultad de Farmacia, Campus Universitario de Cartuja s/n, 18071, Granada, Spain. admoral@ugr.es
Abstract:
We have discovered that many Halomonas species harbour large extrachromosomal DNA elements. Using currently available protocols it is technically very difficult to identify large plasmids in bacteria, and even more so when they are coated in mucous polysaccharide. We used culture conditions suitable for both halophilic and halophilic exopolysaccharide-producing bacteria and applied a modified gel electrophoresis method to locate and visualise the megaplasmids. Almost all the species of Halomonas studied harbour two plasmids of about 70 kb and 600 kb and some species carry other smaller extrachromosomal DNA elements. The common presence of these megaplasmids may well be related to the survival strategies of the bacteria in their special surroundings.
Insights
Researchers found that most Halomonas bacteria contain large extrachromosomal DNA elements called megaplasmids. A modified gel electrophoresis technique was used to visualize these crucial bacterial DNA structures.
Area of Science:
- Microbiology
- Genetics
- Bacterial Physiology
Background:
- Halomonas species are known for their adaptability to saline environments.
- Extrachromosomal DNA elements, such as plasmids, play significant roles in bacterial adaptation and evolution.
- Identifying large plasmids (megaplasmids) in bacteria, especially those producing exopolysaccharides, presents technical challenges.
Purpose of the Study:
- To investigate the presence and characteristics of extrachromosomal DNA elements in Halomonas species.
- To develop and apply a method for visualizing large plasmids in mucous-coated bacteria.
- To understand the potential role of these elements in Halomonas survival.
Main Methods:
- Culturing Halomonas species under conditions supporting halophily and exopolysaccharide production.
- Employing a modified gel electrophoresis technique for the detection and visualization of megaplasmids.
- Analyzing the size and number of extrachromosomal DNA elements present.
Main Results:
- Most Halomonas species examined harbor at least two large plasmids, approximately 70 kb and 600 kb in size.
- Some species were found to possess additional smaller extrachromosomal DNA elements.
- The modified gel electrophoresis method successfully visualized megaplasmids in these challenging bacterial samples.
Conclusions:
- The widespread presence of megaplasmids in Halomonas suggests their importance for the bacteria.
- These extrachromosomal elements likely contribute to the survival strategies of Halomonas in their specialized, high-salt environments.
- The developed method enhances the ability to study large plasmids in bacteria with complex cell surface structures.
Related Concept Videos
Plasmids
Bacterial Phylum Tenericutes
Bacterial Phylum Proteobacteria
Genomic DNA in Prokaryotes
Genomic Diversity in Bacteria
Although bacterial genomes are much...
Bacterial Phylum Planctomycetes
Cytoskeletal Proteins in Bacteria

