Deregulation of the TP53/p14ARF tumor suppressor pathway in low-grade diffuse astrocytomas and its influence on
Takao Watanabe1, Yoichi Katayama, Atsuo Yoshino
1Department of Neurological Surgery, Nihon University School of Medicine, Tokyo 173-8610, Japan. takao@med.nihon-u.ac.jp
Purpose:
The chromosome 9p21 region harbors three tumor suppressor genes, p14(ARF), p15(INK4b), and p16(INK4a), all of which can be targets for hypermethylation-associated inactivation in low-grade gliomas. p16(INK4a) and p15(INK4b) are critically involved in the RB1 pathway, whereas p14(ARF) acts as an upstream regulator of the TP53 pathway. The role of each tumor suppressor pathway in low-grade diffuse astrocytomas and their relationships with clinical behavior remain to be elucidated.
Experimental Design:
We assessed the alterations of the RB1/CDK4/p16(INK4a)/p15(INK4b) and the TP53/MDM2/p14(ARF) pathways in 46 WHO grade II astrocytomas and analyzed their impact on prognosis.
Results:
The TP53/MDM2/p14(ARF) pathway was altered in 32 of 46 cases (70%) by either TP53 mutation (25 cases) or p14(ARF) methylation (9 cases). The RB1/CDK4/p16(INK4a)/p15(INK4b) pathway was disrupted in 6 of 46 cases (13%) by either RB1 methylation (1 case), p16(INK4a) methylation (3 cases), or p15(INK4b) methylation or homozygous deletion (3 cases). Generally speaking, individual tumors thus tended to display alteration of only one component from both pathways. Any independently analyzed genetic alteration failed to provide statistically prognostic information. The alternate or simultaneous presence of TP53 mutation and p14(ARF) methylation emerged as a univariate predictor of a shorter progression-free survival (P = 0.0456) but was not statistically significant when age and extent of surgery were included in the analysis.
Conclusions:
Alternative disruption of the TP53/p14(ARF) pathway represents a frequent event in low-grade diffuse astrocytomas and correlates with an unfavorable clinical course. However, its value is unlikely to include prognostic utility that is independent of other conventional prognostic factors.
Insights
Disruption of the TP53/p14(ARF) pathway is common in low-grade astrocytomas and linked to a poorer prognosis. However, this finding may not be independently prognostic.
Area of Science:
- Neuro-oncology
- Molecular Biology
- Genetics
Background:
- The 9p21 region contains tumor suppressor genes p14(ARF), p15(INK4b), and p16(INK4a), crucial in glioma development.
- These genes inactivate tumor suppressor pathways, including RB1 and TP53, and are often hypermethylated in low-grade gliomas.
- Understanding their specific roles and impact on clinical outcomes in diffuse astrocytomas is essential.
Purpose of the Study:
- To investigate alterations in the RB1/CDK4/p16(INK4a)/p15(INK4b) and TP53/MDM2/p14(ARF) pathways.
- To analyze the prognostic impact of these pathway alterations in 46 WHO grade II astrocytomas.
Main Methods:
- Assessed genetic alterations in the RB1 and TP53 tumor suppressor pathways.
- Analyzed TP53 mutations, p14(ARF) methylation, and alterations in the RB1 pathway components.
- Correlated genetic findings with clinical behavior and patient prognosis.
Main Results:
- The TP53/MDM2/p14(ARF) pathway was altered in 70% of cases (TP53 mutation or p14(ARF) methylation).
- The RB1/CDK4/p16(INK4a)/p15(INK4b) pathway was altered in 13% of cases (methylation or deletion).
- Combined TP53 mutation and p14(ARF) methylation predicted shorter progression-free survival but lacked independent prognostic value.
Conclusions:
- Alternative disruption of the TP53/p14(ARF) pathway is frequent in low-grade diffuse astrocytomas.
- This pathway disruption correlates with a less favorable clinical course.
- Its prognostic utility is limited when considering established prognostic factors.
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