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Studying Cell Cycle-regulated Gene Expression by Two Complementary Cell Synchronization Protocols
Published on: June 6, 2017
The cell cycle, cyclin-dependent kinases, and viral infections: new horizons and unexpected connections
1Departments of Biochemistry and Medical Microbiology and Immunology, Signal Transduction Research Group, University of Alberta, Heritage Medical Research Building, Rm. 315, Edmonton, Alberta T6G 2S2, Canada.
Abstract:
The genomes of small DNA viruses such as papilloma and polyomaviruses code for few or no DNA replication proteins. Consequently, these viruses depend on cellular DNA replication proteins to replicate their genomes and replicate only when the infected cell progresses into S-phase, when these proteins are active. As a consequence of this strict dependence, the relationship between replication of the small DNA viruses and the cell cycle was obvious from the very early studies. The genomes of larger DNA viruses such as adeno- and herpes-viruses, in contrast, encode many of the proteins required for DNA replication. Some of the larger DNA viruses such as adenoviruses, however, also replicate only in S-phase because expression of viral DNA replication proteins is regulated by cellular factors that are activated in S-phase. Other large DNA viruses such as herpes simplex viruses (HSV) can replicate in arrested cells such as neurons, without inducing progression into S-phase. The relationships between cell cycle and replication of these last viruses are, thus, so subtle that their replication was long thought to be independent from cellular proteins whose activities are regulated in a cell cycle dependent manner. In contrast to this hypothesis, recent studies have shown that replication of HSV and other large DNA viruses requires cellular proteins whose activities are normally regulated in a cell cycle dependent manner, such as the cyclin-dependent kinases (cdks). Many excellent reviews on the interactions between cellular proteins involved in cell cycle regulation and smaller DNA viruses (parvo, papilloma, polyoma and adenoviruses) have been published (for example, see (1, 2)). Many reviews on cell cycle regulation also discuss the interactions between the cell cycle and the smaller DNA viruses (for example, see (3-5)). Herein, we will review these relationships only briefly, while focusing on the interactions between cell cycle proteins such as cdks and herpes-, retro, and hepadna-viruses. We will then succinctly discuss the surprising relationships between cdks and replication of some cytoplasmic RNA viruses. Lastly, we will present the possibility of applying the new information on the dependence of viral replication on cyclin-dependent kinases to the development of novel antiviral drugs.
Insights
Viral replication, including herpesviruses, depends on cell cycle proteins like cyclin-dependent kinases (cdks). This discovery opens avenues for novel antiviral drug development targeting these essential cellular interactions.
Area of Science:
- Virology
- Molecular Biology
- Cell Cycle Regulation
Background:
- Small DNA viruses (papilloma, polyoma) rely on host cell S-phase proteins for replication.
- Larger DNA viruses (adeno-, herpes-) encode replication proteins but often still require S-phase or cell cycle factors.
- Replication of some large DNA viruses, like herpes simplex virus (HSV), was previously thought to be cell cycle-independent.
Purpose of the Study:
- To review the relationship between viral replication and the cell cycle.
- To focus on the interactions between cell cycle proteins, particularly cyclin-dependent kinases (cdks), and herpes-, retro-, and hepadnaviruses.
- To explore the role of cdks in the replication of some cytoplasmic RNA viruses.
- To discuss the potential for developing antiviral drugs based on these interactions.
Main Methods:
- Literature review focusing on viral replication and cell cycle interactions.
- Analysis of studies investigating the role of cellular proteins, including cdks, in viral replication.
- Synthesis of information on viruses requiring S-phase versus those with more complex dependencies.
Main Results:
- Small DNA viruses strictly depend on S-phase proteins.
- While larger DNA viruses encode more proteins, their replication is often regulated by cell cycle-dependent factors.
- Recent findings reveal that HSV and other large DNA viruses require cell cycle-regulated proteins like cdks.
- Unexpected roles for cdks in the replication of some RNA viruses have been identified.
Conclusions:
- Viral replication is intricately linked to the host cell cycle, even for viruses previously thought to be independent.
- Cyclin-dependent kinases (cdks) play a crucial role in the replication of a wide range of viruses, including herpes-, retro-, hepadna-, and even some RNA viruses.
- Understanding these dependencies provides a basis for developing novel antiviral therapies targeting host-viral interactions.
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