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Updated: Aug 9, 2026

Associated Chromosome Trap for Identifying Long-range DNA Interactions
Published on: April 23, 2011
MLL fusion partners AF4 and AF9 interact at subnuclear foci
F Erfurth1, C S Hemenway, A C de Erkenez
1Department of Pathology, The University of Chicago, Chicago, IL, USA. ferfurt@lumc.edu
Abstract:
The MLL gene is involved in translocations associated with both acute lymphoblastic and acute myelogenous leukemia. These translocations fuse MLL with one of over 30 partner genes. Collectively, the MLL partner genes do not share a common structural motif or biochemical function. We have identified a protein interaction between the two most common MLL fusion partners AF4 and AF9. This interaction is restricted to discrete nuclear foci we have named 'AF4 bodies'. The AF4 body is non-nucleolar and is not coincident with any known nuclear structures we have examined. The AF4-AF9 interaction is maintained by the MLL-AF4 fusion protein, and expression of the MLL-AF4 fusion can alter the subnuclear localization of AF9. In view of other research indicating that other MLL fusion partners also interact with one another, these results suggest that MLL fusion partners may participate in a web of protein interactions with a common functional goal. The disruption of this web of interactions by fusion with MLL may be important to leukemogenesis.
Insights
Researchers discovered a protein interaction between AF4 and AF9, key MLL fusion partners in leukemia. This interaction forms distinct nuclear structures called AF4 bodies, suggesting a web of interactions disrupted in leukemogenesis.
Area of Science:
- Molecular Biology
- Cancer Research
- Cell Biology
Background:
- The Mixed Lineage Leukemia (MLL) gene is frequently altered in acute leukemias.
- MLL gene translocations fuse MLL with over 30 different partner genes.
- MLL fusion partners lack shared structural or functional characteristics.
Purpose of the Study:
- To investigate potential protein interactions among MLL fusion partners.
- To characterize the subnuclear localization of interacting MLL fusion partners.
Main Methods:
- Protein interaction studies using co-immunoprecipitation.
- Subcellular localization analysis via immunofluorescence microscopy.
- Investigation of MLL-AF4 fusion protein effects on AF9 localization.
Main Results:
- Identified a novel protein interaction between AF4 and AF9, common MLL fusion partners.
- Observed this interaction localized to discrete nuclear structures termed 'AF4 bodies'.
- Demonstrated that the MLL-AF4 fusion protein maintains the AF4-AF9 interaction and can alter AF9's subnuclear localization.
Conclusions:
- MLL fusion partners may form a network of interactions crucial for cellular function.
- Disruption of this interaction network by MLL fusion is a potential mechanism in leukemogenesis.
- AF4 bodies represent novel nuclear structures involved in MLL-related leukemia pathogenesis.
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