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Monitoring Stub1-Mediated Pexophagy
Published on: May 12, 2023
Novel mutations in the PEX2 gene of four unrelated patients with a peroxisome biogenesis disorder
Jeannette Gootjes1, Orly Elpeleg, François Eyskens
1Lab. Genetic Metabolic Diseases (F0-224), Department of Clinical Chemistry and Peadiatrics, Emma Children's Hospital, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands.
Insights
Peroxisome biogenesis disorders (PBDs) linked to PEX2 gene mutations show varied severity. Novel PEX2 mutations in four patients reveal genotype-phenotype correlations, impacting protein domains crucial for peroxisome function.
Area of Science:
- Genetics
- Cell Biology
- Biochemistry
Background:
- Peroxisome biogenesis disorders (PBDs) are a heterogeneous group of genetic conditions.
- Zellweger syndrome (ZS), neonatal adrenoleukodystrophy (NALD), and infantile Refsum disease (IRD) are key PBDs with shared symptoms like liver disease and neurodevelopmental issues.
- Complementation group 10 (CG10) PBDs involve mutations in the PEX2 gene, encoding a protein vital for peroxisomal protein import.
Purpose of the Study:
- To identify and characterize mutations in the PEX2 gene in four patients with PBDs belonging to CG10.
- To investigate the correlation between novel PEX2 mutations and the clinical phenotypes observed in these patients.
- To understand the functional impact of PEX2 mutations on protein structure and peroxisomal import.
Main Methods:
- Genetic analysis of the PEX2 gene in four PBD patients.
- Sequencing to identify mutations within the PEX2 gene.
- Correlation of identified mutations with patient clinical presentations and PEX2 protein domains.
Main Results:
- Four distinct PEX2 mutations were identified in the four CG10 PBD patients, with three being novel.
- Two patients with homozygous mutations had truncated PEX2 proteins lacking transmembrane and zinc-binding domains, correlating with severe phenotypes.
- One patient with a W223X mutation (lacking the zinc-binding domain) exhibited a mild phenotype, while a C247R mutation (affecting the zinc-binding domain) resulted in a severe phenotype.
Conclusions:
- The study identified novel PEX2 mutations in PBD patients, expanding the known mutational spectrum for CG10.
- Genotype-phenotype correlations in PEX2 mutations are complex, with some mutations affecting critical domains leading to varied disease severity.
- The findings suggest that PEX2 protein instability or dominant-negative effects may contribute to the observed phenotypic variability in PBDs.
Abstract:
The peroxisome biogenesis disorders (PBDs) form a genetically and clinically heterogeneous group of disorders due to defects in at least 11 distinct genes. The prototype of this group of disorders is Zellweger syndrome (ZS) with neonatal adrenoleukodystrophy (NALD) and infantile Refsum disease (IRD) as milder variants. Common to PBDs are liver disease, variable neurodevelopmental delay, retinopathy and perceptive deafness. PBD patients belonging to complementation group 10 (CG10) have mutations in the PEX2 gene (PXMP3), which codes for a protein (PEX2) that contains two transmembrane domains and a zinc-binding domain considered to be important for its interaction with other proteins of the peroxisomal protein import machinery. We report on the identification of four PBD patients belonging to CG10. Sequence analysis of their PEX2 genes revealed 4 different mutations, 3 of which have not been reported before. Two of the patients had homozygous mutations leading to truncated proteins lacking both transmembrane domains and the zinc-binding domain. These mutations correlated well with their severe phenotypes. The third patient had a homozygous mutation leading to the absence of the zinc-binding domain (W223X) and the fourth patient had a homozygous mutation leading to the change of the second cysteine residue of the zinc-binding domain (C247R). Surprisingly, the patient lacking the domain had a mild phenotype, whereas the C247R patient had a severe phenotype. This might be due to an increased instability of PEX2 due to the R for C substitution or to a dominant negative effect on interacting proteins.
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