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Updated: Aug 14, 2026

Evaluation of the Impact of Protein Aggregation on Cellular Oxidative Stress in Yeast
Published on: June 23, 2018
beta2-microglobulin H31Y variant 3D structure highlights the protein natural propensity towards intermolecular
C Rosano1, S Zuccotti, P Mangione
1Istituto Nazionale Ricerca sul Cancro-IST, X-ray Structural Biology Unit, Largo Rosanno Benzi 10, 16132 Genova, Italy.
Abstract:
beta2-Microglobulin (beta2m) is the non-covalently bound light chain of the human class I major histocompatibility complex (MHC-I). The natural turnover of MHC-I gives rise to the release of beta2m into plasmatic fluids and to its catabolism in the kidney. beta2m dissociation from the heavy chain of the complex is a severe complication in patients receiving prolonged hemodialysis. As a consequence of renal failure, the increasing beta2m concentrations can lead to deposition of the protein as amyloid fibrils. Here we characterize the His31-->Tyr human beta2m mutant, a non-natural form of beta2m that is more stable than the wild-type protein, displaying a ten-fold acceleration of the slow phase of folding. We report the 2.9A resolution crystal structure and the NMR characterization of the mutant beta2m, focussing on selected structural features and on the molecular packing observed in the crystals. Juxtaposition of the four mutant beta2m molecules contained in the crystal asymmetric unit, and specific hydrogen bonds, stabilize a compact protein assembly. Conformational heterogeneity of the four independent molecules, some of their mutual interactions and partial unpairing of the N-terminal beta-strand in one protomer are in keeping with the amyloidogenic properties displayed by the mutant beta2m.
Insights
A novel human beta2-microglobulin (beta2m) mutant, His31-->Tyr, exhibits enhanced stability and accelerated folding. This mutant displays structural features and molecular packing consistent with amyloidogenic properties, offering insights into protein misfolding diseases.
Area of Science:
- Biochemistry
- Structural Biology
- Molecular Medicine
Background:
- Beta2-microglobulin (beta2m) is the light chain of human class I major histocompatibility complex (MHC-I).
- Renal failure and hemodialysis can lead to elevated beta2m levels, causing amyloid fibril deposition.
- Protein stability and folding dynamics are crucial for understanding beta2m-associated pathologies.
Purpose of the Study:
- To characterize the structural and folding properties of the His31-->Tyr human beta2m mutant.
- To investigate the molecular basis of the mutant's enhanced stability and amyloidogenic potential.
- To elucidate the role of specific structural features and molecular packing in protein assembly.
Main Methods:
- X-ray crystallography at 2.9A resolution to determine the mutant's three-dimensional structure.
- Nuclear Magnetic Resonance (NMR) spectroscopy for detailed molecular characterization.
- Analysis of protein-protein interactions and hydrogen bonding within the crystal structure.
Main Results:
- The His31-->Tyr mutant demonstrates a ten-fold faster slow phase of folding compared to wild-type beta2m.
- Crystal structure reveals a compact protein assembly stabilized by intermolecular interactions and hydrogen bonds.
- Observed conformational heterogeneity and N-terminal beta-strand unpairing in one protomer suggest amyloidogenic propensity.
Conclusions:
- The His31-->Tyr beta2m mutant exhibits increased stability and altered folding kinetics.
- Specific structural features and crystal packing contribute to a stable, yet potentially amyloidogenic, protein assembly.
- This mutant serves as a valuable model for studying the structural underpinnings of beta2m amyloidosis.
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