[Methods for handling incomplete data in health research: a critical look]
Related Experiment Video
Updated: Aug 26, 2026

Inverse Probability of Treatment Weighting (Propensity Score) using the Military Health System Data Repository and National Death Index
Published on: January 8, 2020
Maylée Cañizares1, Isabel Barroso, Karen Alfonso
1Instituto Nacional de Higiene, Epidemiología y Microbiología, Havana, Cuba. mcperez@yahoo.com
Objective:
To illustrate methods for handling incomplete data in health research.
Methods:
Two strategies for handling missing data are presented: complete-case analysis and imputations. The imputations used were mean imputations, regression imputations, and multiple imputations. These strategies are illustrated in the context of logistic regression through an example using data from the "Second Cuban national survey on risk factors and non communicable disease", carried out in 2001.
Results:
The results obtained via mean and regression imputation were similar. The odds ratios were overestimated by 10%. The results of complete-case analysis showed the greatest difference from the reference odds ratios, with a variation of between 2 and 65%. The three methods distorted the relationship between age and hypertension. Multiple imputations produced estimates closest to those of the reference estimates with a variation of less than 16%. This was the only procedure preserving the relationship between age and hypertension.
Conclusions:
Selecting methods for handling missing data is difficult, since the same procedure can give precise estimations in certain circumstances and not in others. Complete-case analysis should be used with caution due to the substantial loss of information it produces. Mean and regression imputations produce unreliable estimates under missing at random (MAR) mechanisms.
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