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Assessment of evolution of pandemic Vibrio parahaemolyticus by multilocus sequence typing
Nandini Roy Chowdhury1, O Colin Stine, J Glenn Morris
1National Institute of Cholera and Enteric Diseases, Calcutta, India.
Abstract:
The genetic relatedness of 81 isolates of Vibrio parahaemolyticus was assessed by multilocus sequence typing. The strain with serotype O3:K6 emerged as a pandemic pathogen in 1996, with subsequent expansion to include strains having serotypes O1:KUT, O4:K68, and O1:K25. Sequence data from gyrB, recA, dnaE, and gnd revealed that 16 distinct serogroups isolated prior to the pandemic were highly variable and only isolates of serogroup O3:K6 shared two alleles with the pandemic strains. The pandemic strains regardless of serotype were clonal, with 51 of 54 isolates having the identical allelic profile (AP). Serotype alone did not adequately define a pandemic strain: among O1:KUT strains tested, seven strains with the identical pandemic AP carried previously described pandemic markers, while five nonpandemic strains had five distinct APs. Our sequence data provide strong molecular support for the clonal origin of pandemic V. parahaemolyticus O3:K6 and suggest that strains within such a clonal group may acquire previously identified serotypes.
Insights
Pandemic Vibrio parahaemolyticus strains, including O3:K6, originated from a single clonal group. Genetic analysis revealed that these pandemic strains, regardless of serotype, share identical genetic profiles, supporting their common origin.
Area of Science:
- Microbiology
- Genetics
- Epidemiology
Background:
- Vibrio parahaemolyticus O3:K6 emerged as a pandemic pathogen in 1996.
- Subsequent pandemic strains included serotypes O1:KUT, O4:K68, and O1:K25.
- Understanding the genetic relatedness of these strains is crucial for tracking and controlling outbreaks.
Purpose of the Study:
- To assess the genetic relatedness of 81 Vibrio parahaemolyticus isolates.
- To determine the clonal origin of pandemic Vibrio parahaemolyticus strains.
- To investigate the relationship between serotype and pandemic potential.
Main Methods:
- Multilocus sequence typing (MLST) was performed on 81 Vibrio parahaemolyticus isolates.
- Specific genes (gyrB, recA, dnaE, and gnd) were sequenced.
- Allelic profiles (AP) were compared among isolates.
Main Results:
- Pandemic Vibrio parahaemolyticus strains, irrespective of serotype, exhibited a clonal origin with 51 of 54 isolates sharing an identical allelic profile.
- Pre-pandemic serogroups showed high genetic variability, with only O3:K6 isolates sharing alleles with pandemic strains.
- Serotype alone was insufficient to define a pandemic strain; some O1:KUT strains with pandemic allelic profiles were identified, while others were not.
Conclusions:
- Strong molecular evidence supports a clonal origin for pandemic Vibrio parahaemolyticus O3:K6.
- Strains within a clonal group can acquire diverse serotypes, highlighting the limitations of serotyping for pandemic strain identification.
- Genetic relatedness analysis, such as MLST, is essential for understanding pathogen evolution and spread.
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