CARD15 and HLA DRB1 alleles influence susceptibility and disease localization in Crohn's disease
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Published on: September 22, 2019
Bill Newman1, Mark S Silverberg, Xiangjun Gu
1Department of Medicine, University of Toronto, Toronto, Canada.
Insights
Genetic variants in CARD15 and HLA-DRB1 influence Crohn's disease (CD) susceptibility and disease site. Genotyping these variants can aid in diagnosing and predicting CD risk and ileal involvement.
Area of Science:
- Genetics
- Gastroenterology
- Immunology
Background:
- Crohn's disease (CD) is a chronic inflammatory bowel disease.
- Genetic factors, including CARD15 and HLA-DRB1 gene variants, are known contributors to CD susceptibility.
- Understanding the prevalence and impact of these variants in diverse populations is crucial for disease management.
Purpose of the Study:
- To investigate the prevalence of CARD15 and HLA-DRB1 gene variants in a Canadian Crohn's disease cohort.
- To determine the association of these genetic variants with CD susceptibility and clinical presentation, including disease location.
- To evaluate the potential of combined genotyping for predicting disease characteristics.
Main Methods:
- Genotyping of 507 unrelated CD patients for three major CARD15 variants (Arg702Trp, Gly908Arg, Leu1007fsinsC) and thirteen HLA-DRB1 alleles.
- Comparison of variant prevalence between CD patients and controls.
- Statistical analysis to assess associations between genotypes and clinical phenotypes.
Main Results:
- At least one CARD15 variant was found in 32.5% of CD patients versus 20% of controls.
- The Gly908Arg variant was more frequent in Jewish CD patients, while Arg702Trp was less frequent compared to non-Jewish patients.
- HLA-DRB1*0103 was associated with increased CD risk (6.7-fold), later diagnosis, and colonic disease, while CARD15 variants were linked to ileal involvement (OR=1.8).
- Combined CARD15 and HLA-DRB1 genotyping predicted ileal disease with significant accuracy.
Conclusions:
- CARD15 and HLA-DRB1 alleles significantly influence Crohn's disease susceptibility and the site of inflammation.
- Genotyping these genetic variants offers a promising tool for enhanced diagnosis and risk stratification in CD patients.
- This approach can help personalize patient management strategies based on genetic predisposition and predicted disease course.
Objectives:
Crohn's disease (CD) is a chronic inflammatory disease of the gut associated with allelic variants of CARD15 and HLA-DRB1 genes. We investigated the prevalence and effects of these variants in a Canadian CD cohort.
Methods:
507 unrelated CD patients were genotyped for the three major CD-associated variants (Arg702Trp, Gly908Arg, and Leu1007fsinsC) and for thirteen HLA-DRB1 alleles.
Results:
At least one CARD15 variant was present in 32.5% of the CD patients compared with 20% of controls. The prevalence of CARD15 mutation was similar in both sporadic and familial and Jewish and non-Jewish CD patients. The Gly908Arg variant was significantly higher and the Arg702Trp variant significantly lower in Jewish compared to non-Jewish patients. A positive association between the HLA-DRB1*0103 allele and CD was detected in non-Jewish, familial cases (p = 0.0002), with risk for CD increased by 6.7 fold by the presence of an HLA-DRB1*0103 allele as compared to 1.9 fold and 19 fold by a single or two CARD15 variant alleles, respectively. We show a significant association of ileal involvement with CARD15 variants (OR = 1.8; p = 0.02), HLA-DRB1*0701 (OR = 1.9; p = 0.006) and DRB1*04 (OR = 1.7; p = 0.02) alleles and demonstrate the capacity of combined CARD15 and HLA-DRB1 genotyping to predict ileal disease in CD patients. By contrast, the HLA-DRB1*0103 allele was associated with later age of diagnosis (p = 0.02) and pure colonic disease (p = 0.000013).
Conclusions:
These observations confirm the influence of CARD15 and HLA-DRB1 alleles on both CD susceptibility and site of disease and identify genotyping of these variants as a potential tool for improved diagnosis and risk prediction in CD.
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