Light-activated transcription and repression by using photocaged SERMs

Youheng Shi1, John T Koh

  • 1Department of Chemistry and Biochemistry, University of Delaware, Newark, DE 19716, USA.

Insights

Researchers developed photocaged selective estrogen receptor modulators (SERMs) for light-controlled gene expression. These compounds offer precise temporal and spatial control over gene activity, advancing research into gene function.

Area of Science:

  • Molecular Biology
  • Genetics
  • Pharmacology

Background:

  • Gene spatiotemporal patterning is crucial for biological functions.
  • Photocaged ligands offer light-directed control over gene expression.
  • Nuclear receptors play key roles in gene regulation.

Purpose of the Study:

  • To evaluate photocaged analogues of selective estrogen receptor modulators (SERMs) for controlling gene expression patterning.
  • To investigate the light-directed actions of photocaged SERMs on estrogen receptor (ER) activity.
  • To explore the simultaneous control of transcription activation and repression using photocaged SERMs.

Main Methods:

  • Synthesis of photocaged hydroxytamoxifen (NB-Htam) and guanidine tamoxifen (NB-Gtam).
  • Evaluation of NB-Htam and NB-Gtam for antagonizing ER alpha- and ER beta-mediated transcription at estrogen response elements (EREs).
  • Assessment of transcription recovery rates upon SERM diffusion from cells.
  • Investigation of ER beta-mediated transcription activation at AP1 sites.

Main Results:

  • NB-Htam and NB-Gtam selectively antagonize ER alpha and ER beta transcription in response to light.
  • Intracellular Htam and Gtam induce transient transcriptional repression.
  • Transcription recovery rates for Htam and Gtam are faster than for tamoxifen aziridine (Taz), suggesting ligand off-rates/diffusion control duration.
  • Gtam activates ER beta-mediated transcription at AP1 sites.
  • Photocaged SERMs enable light-activated transcription and repression simultaneously.

Conclusions:

  • Photocaged SERMs provide precise light-directed control over gene expression.
  • Ligand off-rates and diffusion, rather than receptor turnover, dictate the duration of SERM action.
  • These tools allow for simultaneous light-activated transcription and repression, offering novel research capabilities.

Related Concept Videos

Cell Specific Gene Expression01:58

Cell Specific Gene Expression

Multicellular organisms contain a variety of structurally and functionally distinct cell types, but the DNA in all the cells originated from the same parent cells. The differences in the cells can be attributed to the differential gene expression. Liver cells, whose functions include detoxification of blood, production of bile to metabolize fats, and synthesis of proteins essential for metabolism, must express a specific set of genes to perform their functions. Gene expression also varies with...
Co-activators and Co-repressors02:04

Co-activators and Co-repressors

Gene transcription is regulated by the synergistic action of several proteins that form a complex at a gene regulatory site. This is observed in eukaryotes, where the regulation of gene expression is a complex process. Regulatory proteins in eukaryotes can broadly be classified into two types – regulators that bind directly to specific DNA sequences and co-regulators that associate with regulatory proteins but cannot directly bind to the DNA. These co-regulators are further divided into...
Eukaryotic Transcription Inhibitors01:52

Eukaryotic Transcription Inhibitors

Certain biochemical processes, such as embryonic development and cell growth regulation, depend on the repression of specific genes. DNA binding proteins known as eukaryotic transcription inhibitors regulate the repression of gene expression in eukaryotes. The presence of these inhibitors at the required location and time in the cell is triggered by the presence of hormones and additional signals from other cells.
Eukaryotic transcription inhibitors usually contain two distinct domains, a DNA...
Master Transcription Regulators02:23

Master Transcription Regulators

Master transcription regulators are regulatory proteins that are predominantly responsible for regulating the expression of multiple genes. Often these genes work in concert to drive a  complex process. Activation of a master transcription regulator can lead to a cascade of transcriptional activation necessary for that outcome. These regulators can directly bind to the regulatory sequences of the various genes involved, or they can indirectly regulate transcription by binding to regulatory...
Circadian Rhythms and Gene Regulation02:19

Circadian Rhythms and Gene Regulation

The biological clock is involved in many aspects of regulating complex physiology in all animals. It was in 1935 when German zoologists, Hans Kalmus and Erwin Bünning, discovered the existence of circadian rhythm in Drosophila melanogaster. However, the internal molecular mechanisms behind the circadian clock remained a mystery until 1984, when Jeffrey C. Hall, Michael Rosbash, and Michael W. Young discovered the expression of the Per gene oscillating over a 24-hour cycle. In subsequent years,...
Reporter Genes02:11

Reporter Genes

Reporter genes are a type of protein-coding gene that are often tagged to a gene of interest. Once inside a target cell, reporter genes usually produce visually identifiable characteristics like fluorescence and luminescence when expressed along with the gene of interest. Thus, reporter genes “report” the presence or absence of genes of interest in an organism, determine the gene expression pattern, or track the physical location of a DNA segment or protein in the cell.
Commonly used reporter...