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Updated: Aug 2, 2026

RNA Secondary Structure Prediction Using High-throughput SHAPE
Published on: May 31, 2013
Conserved RNA secondary structures in viral genomes: a survey
I L Hofacker1, P F Stadler, R R Stocsits
1Institut für Theoretische Chemie und Molekulare Strukturbiologie, Universität Wien, Währingerstrasse 17, Vienna, A-1090, Austria. ivo@tbi.univie.ac.at
Summary:
The genomes of RNA viruses often carry conserved RNA structures that perform vital functions during the life cycle of the virus. Such structures can be detected using a combination of structure prediction and co-variation analysis. Here we present results from pilot studies on a variety of viral families performed during bioinformatics computer lab courses in past years.
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