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Importing MAGE-ML format microarray data into BioConductor
Steffen Durinck1, Joke Allemeersch, Vincent J Carey
1Department of Electronical Engineering, ESAT-SCD, K.U. Leuven, Kasteelpark Arenberg 10, 3001, Leuven-Heverlee, Belgium.
Unlabelled:
The microarray gene expression markup language (MAGE-ML) is a widely used XML (eXtensible Markup Language) standard for describing and exchanging information about microarray experiments. It can describe microarray designs, microarray experiment designs, gene expression data and data analysis results. We describe RMAGEML, a new Bioconductor package that provides a link between cDNA microarray data stored in MAGE-ML format and the Bioconductor framework for preprocessing, visualization and analysis of microarray experiments.
Availability:
http://www.bioconductor.org. Open Source.
