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Updated: Jul 11, 2026

Experimental Human Pneumococcal Carriage
Published on: February 15, 2013
Association between carriage of Streptococcus pneumoniae and Staphylococcus aureus in Children
Gili Regev-Yochay1, Ron Dagan, Meir Raz
1Sheba Medical Center, Tel Hashomer, Israel. gili.regev@sheba.health.gov.il
Insights
Streptococcus pneumoniae carriage is inversely linked to Staphylococcus aureus carriage in children. This interaction is important for understanding respiratory tract flora changes, especially with pneumococcal conjugate vaccination.
Area of Science:
- Pediatric infectious diseases
- Microbiology
- Epidemiology
Background:
- Pneumococcal conjugate vaccination may alter upper respiratory tract flora in children.
- Emergence of community-acquired methicillin-resistant Staphylococcus aureus (CA-MRSA) highlights potential interactions with Streptococcus pneumoniae.
Purpose of the Study:
- To determine the prevalence and risk factors for Streptococcus pneumoniae and Staphylococcus aureus carriage in young children before widespread vaccination.
- To investigate the relationship between carriage of these two common respiratory pathogens.
Main Methods:
- Cross-sectional surveillance study conducted in primary care clinics in central Israel.
- Nasopharyngeal and nasal swabs collected from 790 children aged 40 months or younger.
- Analysis of carriage rates, serotypes for S. pneumoniae, and associated risk factors for both pathogens.
Main Results:
- Prevalence: 43% carried S. pneumoniae, 10% carried S. aureus.
- Inverse Association: S. pneumoniae carriage was lower in S. aureus carriers (27.5% vs 44.8%). S. aureus carriage was lower in S. pneumoniae carriers (6.5% vs 12.9%).
- Dual Carriage: Only 2.8% carried both pathogens, which was less than the expected 4.3% (P=.03). Risk factors for S. pneumoniae carriage were negatively associated with S. aureus carriage.
Conclusions:
- Streptococcus pneumoniae carriage, particularly vaccine-type strains, is negatively associated with Staphylococcus aureus carriage in children.
- These findings suggest a complex interaction between these pathogens that warrants further investigation in the context of pneumococcal vaccination programs.
Context:
Widespread pneumococcal conjugate vaccination may bring about epidemiologic changes in upper respiratory tract flora of children. Of particular significance may be an interaction between Streptococcus pneumoniae and Staphylococcus aureus, in view of the recent emergence of community-acquired methicillin-resistant S aureus.
Objective:
To examine the prevalence and risk factors of carriage of S pneumoniae and S aureus in the prevaccination era in young children.
Design, Setting, And Patients:
Cross-sectional surveillance study of nasopharyngeal carriage of S pneumoniae and nasal carriage of S aureus by 790 children aged 40 months or younger seen at primary care clinics in central Israel during February 2002.
Main Outcome Measures:
Carriage rates of S pneumoniae (by serotype) and S aureus; risk factors associated with carriage of each pathogen.
Results:
Among 790 children screened, 43% carried S pneumoniae and 10% carried S aureus. Staphylococcus aureus carriage among S pneumoniae carriers was 6.5% vs 12.9% in S pneumoniae noncarriers. Streptococcus pneumoniae carriage among S aureus carriers was 27.5% vs 44.8% in S aureus noncarriers. Only 2.8% carried both pathogens concomitantly vs 4.3% expected dual carriage (P =.03). Risk factors for S pneumoniae carriage (attending day care, having young siblings, and age older than 3 months) were negatively associated with S aureus carriage.
Conclusions:
Streptococcus pneumoniae carriage, specifically of vaccine-type strains, is negatively associated with S aureus carriage in children. The implications of these findings in the pneumococcal vaccine era require further investigation.
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