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Aberrant methylation of RASSF4/AD037 in nasopharyngeal carcinoma
Lillian Shuk-Nga Chow1, Kwok-Wai Lo, Joseph Kwong
1Department of Anatomical and Cellular Pathology, The Chinese University of Hong Kong, The Sir Y.K. Pao Center for Cancer, Prince of Wales Hospital, Shatin, Hong Kong SAR, China. snchow@cuhk.edu.hk
Abstract:
Ras-association domain family of proteins (RASSF) is characterized by the Ras-association (RA) domain at the C-terminal. Frequent inactivation of RASSF1A gene in human cancers suggests that other members of the family may also play an important role in tumorigenesis. By in silico gene searches, the number of RASSF family members is increasing. Two new members of RASSF family, RASSF4/AD037 and NORE1, were recently identified. While the status of RASSF4/AD037 is poorly understood, methylation of NORE1A was reported to be common in human cancers. In this study, we aimed to investigate the expression and methylation status of RASSF4/AD037 and NORE1 in nasopharyngeal carcinoma (NPC) in which RASSF1A is frequently inactivated by promoter hypermethylation. Our results showed that expression of RASSF4/AD037 was lost in 12.5% (1/8) of NPC cell lines/xenografts. Bisulfite sequencing analysis revealed dense methylation in the promoter region of RASSF4/AD037 in the cell line. Restoration of RASSF4/AD037 mRNA was observed by treatment with a demethylating agent. Moreover, methylation of primary NPC was found in 5% (1/20) of the samples examined. For NORE1A, partial methylation was detected in 37.5% (3/8) of NPC cell lines/xenografts while expression of NORE1A was found in all NPC cell lines/xenografts. No aberrant methylation of NORE1A was observed in 20 primary tumors. In summary, epigenetic inactivation of RASSF4/AD037 and NORE1A is rare in NPC, suggesting that these two RASSF family members may not be critical targets for gene inactivation during the tumorigenesis of NPC.
Insights
Epigenetic inactivation of RASSF4/AD037 and NORE1A is rare in nasopharyngeal carcinoma (NPC). These Ras-association domain family (RASSF) members may not be critical targets in NPC tumorigenesis.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- The Ras-association domain family (RASSF) proteins, including RASSF1A, are implicated in cancer, with RASSF1A frequently inactivated by promoter hypermethylation in various human cancers.
- Two less-studied RASSF family members, RASSF4/AD037 and NORE1, have been identified, and their roles in tumorigenesis require elucidation.
- Nasopharyngeal carcinoma (NPC) is known for frequent RASSF1A inactivation, prompting an investigation into other RASSF members in this cancer.
Purpose of the Study:
- To investigate the expression and methylation status of RASSF4/AD037 and NORE1 in nasopharyngeal carcinoma (NPC).
- To determine if epigenetic inactivation of RASSF4/AD037 and NORE1 occurs in NPC and assess their potential role in tumorigenesis.
Main Methods:
- Analysis of RASSF4/AD037 and NORE1 expression in NPC cell lines and xenografts.
- Bisulfite sequencing to assess promoter methylation status of RASSF4/AD037 and NORE1A in NPC samples.
- Treatment with a demethylating agent to evaluate the impact on RASSF4/AD037 expression.
Main Results:
- RASSF4/AD037 expression was lost in 12.5% of NPC cell lines/xenografts, with dense promoter methylation identified and restored by demethylating agents.
- Methylation of RASSF4/AD037 was found in 5% of primary NPC samples.
- Partial methylation of NORE1A was detected in 37.5% of NPC cell lines/xenografts, but no aberrant methylation was observed in primary tumors, and expression was retained in all samples.
Conclusions:
- Epigenetic inactivation of RASSF4/AD037 and NORE1A appears to be infrequent in nasopharyngeal carcinoma.
- These findings suggest that RASSF4/AD037 and NORE1A may not be critical targets for gene inactivation during NPC tumorigenesis.
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