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Updated: Aug 21, 2026

Understanding the Impact of Temperate Bacteriophages on Their Lysogens Through Transcriptomics
Published on: January 5, 2024
Phage-induced change in the stability of mRNAs
Hiroyuki Ueno1, Tetsuro Yonesaki
1Department of Biology, Graduate School of Science, Osaka University, 1-1 Machikaneyama-cho, Toyonaka-shi, Osaka 560-0043, Japan.
Abstract:
The stability of mRNA in Escherichia coli cells changed after phage T4 infection. Stable E. coli mRNAs such as lpp and ompA were drastically destabilized immediately after infection. In contrast, T4 phage soc mRNA that had been unstable before infection became stabilized after infection. The host RNases E and G both contributed to the destabilization of these mRNAs. Accordingly, these RNases may alter their target RNAs before and after infection. An RNA chaperon, Hfq, and polyadenylation at 3' ends of mRNA are known key factors for destabilization of ompA and lpp mRNAs in uninfected cells. However, they had no effect on the destabilization of E. coli mRNAs after infection. On the other hand, T4 infection in the presence of rifampicin or infection of a deletion mutant, Deltatk2, did not destabilize the host mRNAs. These results strongly suggest that a phage-encoded factor is responsible for the destabilization of host mRNAs. Destabilization of host mRNAs was also observed after infection by phages T2 and T7.
Insights
Bacteriophage T4 infection destabilizes stable Escherichia coli mRNA, while stabilizing its own mRNA. A phage-encoded factor, not host factors like RNases E/G, Hfq, or polyadenylation, drives this mRNA instability.
Area of Science:
- Microbiology
- Molecular Biology
- Genetics
Background:
- Bacterial mRNA stability is crucial for gene expression regulation.
- Bacteriophage infection significantly alters host cell processes.
- Host and phage mRNA stability mechanisms are complex and interdependent.
Purpose of the Study:
- To investigate the impact of bacteriophage T4 infection on the stability of both host and phage mRNAs.
- To identify the host and phage factors involved in regulating mRNA stability during infection.
Main Methods:
- Analysis of mRNA stability in Escherichia coli post-infection with bacteriophage T4.
- Investigating the roles of host RNases E and G, Hfq protein, and 3' end polyadenylation.
- Utilizing rifampicin treatment and a Deltatk2 deletion mutant to probe phage-encoded factors.
Main Results:
- Phage T4 infection drastically destabilized stable host mRNAs (lpp, ompA) but stabilized unstable T4 soc mRNA.
- Host RNases E and G contributed to mRNA destabilization.
- Known host destabilization factors (Hfq, polyadenylation) were ineffective post-infection.
- Phage-encoded factors, not host factors, were responsible for host mRNA destabilization, as shown by rifampicin treatment and Deltatk2 mutant experiments.
- Similar destabilization was observed with phages T2 and T7 infections.
Conclusions:
- Bacteriophage infection induces a significant shift in mRNA stability within Escherichia coli.
- A phage-encoded factor is the primary driver of host mRNA destabilization during infection.
- These findings reveal a novel mechanism of host-phage interaction at the post-transcriptional level.
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