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Updated: Aug 11, 2026

Microbiologically Induced Calcite Precipitation Mediated by Sporosarcina pasteurii
Published on: April 16, 2016
Microorganisms and calcium oxalate stone disease
1New York Harbor VA Medical Center and NYU School of Medicine, New York, NY 10010, USA. david.goldfarb@med.va.gov
Certain microorganisms, like Oxalobacter formigenes and lactic acid bacteria, may help prevent kidney stones by metabolizing oxalate. Nanobacteria
Area of Science:
- Microbiology
- Nephrology
- Biochemistry
Background:
- Microorganisms are increasingly recognized for their potential roles in kidney stone pathogenesis and prevention.
- This review focuses on nanobacteria, Oxalobacter formigenes, and lactic acid bacteria, excluding urease-producing organisms.
- The existence and role of nanobacteria in stone formation remain debated, with some viewing them as artifacts.
Purpose of the Study:
- To review the potential roles of specific microorganisms in kidney stone formation and prevention.
- To explore the proposed mechanisms by which nanobacteria, O. formigenes, and lactic acid bacteria may influence stone development.
- To highlight the potential of O. formigenes and lactic acid bacteria in managing hyperoxaluria and preventing calcium oxalate stones.
Main Methods:
- Literature review of studies on nanobacteria, O. formigenes, and lactic acid bacteria in relation to kidney stones.
- Discussion of proposed mechanisms, including nucleation and oxalate metabolism.
- Reference to clinical investigations and ongoing trials involving these microorganisms.
Main Results:
- Nanobacteria are hypothesized to nucleate carbonate apatite, aiding stone formation, but their existence is uncertain.
- Oxalobacter formigenes metabolizes oxalate, potentially reducing urinary oxalate levels and preventing stone formation.
- Lactic acid bacteria have shown potential in reducing urinary oxalate, though the mechanism is unclear.
Conclusions:
- Oxalobacter formigenes and lactic acid bacteria show promise as preventative agents for kidney stones, particularly calcium oxalate stones.
- Further research, including clinical trials, is needed to confirm the efficacy and elucidate the mechanisms of these beneficial bacteria.
- The role of nanobacteria in kidney stone formation remains speculative and requires further investigation.
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