Related Experiment Video
Updated: Aug 21, 2026

Pull-down of Calmodulin-binding Proteins
Published on: January 23, 2012
Interaction of calmodulin with the phosphofructokinase target sequence
Stephen R Martin1, Rodolfo R Biekofsky, Murray A Skinner
1Division of Physical Biochemistry, National Institute for Medical Research, Mill Hill, London NW7 1AA, UK.
Abstract:
Ca4.calmodulin (Ca4.CaM) inhibits the glycolytic enzyme phosphofructokinase, by preventing formation of its active tetramer. Fluorescence titrations show that the affinity of complex formation of Ca4.CaM with the key 21-residue target peptide increases 1000-fold from pH 9.0 to 4.8, suggesting the involvement of histidine and carboxylic acid residues. 1H NMR pH titration indicates a marked increase in pKa of the peptide histidine on complex formation and HSQC spectra show related pH-dependent changes in the conformation of the complex. This unusually strong sensitivity of a CaM-target complex to pH suggests a potential functional role for Ca4.CaM in regulation of the glycolytic pathway.
Insights
Calcium-bound calmodulin (Ca4.CaM) inhibits glycolysis by blocking phosphofructokinase
Area of Science:
- Biochemistry
- Molecular Biology
- Enzyme Regulation
Background:
- Calmodulin (CaM) is a crucial calcium-binding protein involved in cellular signaling.
- Ca4.CaM, the calcium-saturated form of calmodulin, regulates various cellular processes.
- Phosphofructokinase (PFK) is a key regulatory enzyme in the glycolytic pathway.
Purpose of the Study:
- To investigate the pH-dependent interaction between Ca4.CaM and its target peptide.
- To elucidate the molecular mechanisms underlying Ca4.CaM's inhibition of phosphofructokinase.
Main Methods:
- Fluorescence titrations to determine binding affinity.
- 1H NMR pH titration to analyze histidine pKa changes.
- HSQC spectra to assess pH-dependent conformational changes.
Main Results:
- Ca4.CaM binding affinity to the target peptide increased 1000-fold from pH 9.0 to 4.8.
- Evidence suggests involvement of histidine and carboxylic acid residues in binding.
- NMR data revealed a significant increase in peptide histidine pKa and pH-dependent conformational changes in the complex.
Conclusions:
- The Ca4.CaM-target peptide interaction is highly sensitive to pH.
- This pH sensitivity suggests a regulatory role for Ca4.CaM in the glycolytic pathway.
- Understanding these interactions could reveal novel therapeutic targets for metabolic disorders.
Related Concept Videos
Calmodulin-dependent Signaling
The Ca2+-CaM complex does not have enzymatic activity by itself. Instead, the complex binds downstream target proteins, including membrane proteins or enzymes,...
Protein Kinases and Phosphatases
Protein kinases
Many proteins in the cell are regulated by phosphorylation, the addition of a phosphate group. A family of enzymes called kinases...
Phosphorylation
During phosphorylation, protein kinases transfer the terminal phosphate group of ATP to specific amino acid side chains of substrate proteins. Serine, threonine, and tyrosine are the most commonly...
Cooperative Allosteric Transitions
Allosteric Proteins-ATCase
Aspartate transcarbamoylase (ATCase) is a cytosolic enzyme that catalyzes the condensation of L-aspartate and carbamoyl phosphate to N-carbamoyl-L-aspartate. This reaction is the first step in pyrimidine biosynthesis. UTP and CTP, the end products of the pyrimidine synthesis pathway,...
cAMP-dependent Protein Kinase Pathways
