Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Experiment Videos

CandidaDB: a genome database for Candida albicans pathogenomics.

C d'Enfert1, S Goyard, S Rodriguez-Arnaveilhe

  • 1Unité Postulante Biologie et Pathogénicité Fongiques, INRA USC 2019, Institut Pasteur, Paris, France. denfert@pasteur.fr

Nucleic Acids Research
|December 21, 2004
PubMed
Summary

Related Concept Videos

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Search for neutral minimal supersymmetric standard model Higgs bosons decaying to tau pairs produced in association with b quarks in pp collisions at √s = 1.96 TeV.

Physical review letters·2011
Same author

Precision measurement of the ratio B(t→Wb)/B(t→Wq) and extraction of V(tb).

Physical review letters·2011
Same author

Shock waves in capillary collapse of colloids: a model system for two-dimensional screened Newtonian gravity.

Physical review letters·2011
Same author

Measurement of the inclusive jet cross section in pp collisions at √s = 7 TeV.

Physical review letters·2011
Same author

Search for three-jet resonances in pp collisions at square root(s)=7  TeV.

Physical review letters·2011
Same author

Search for a fourth generation t' Quark in p ̄p collisions at √s = 1.96 TeV.

Physical review letters·2011

CandidaDB provides a comprehensive genomic database for Candida albicans, a major human fungal pathogen. This resource aids researchers in analyzing gene function and understanding the C. albicans genome.

Area of Science:

  • Mycology
  • Genomics
  • Bioinformatics

Background:

  • Candida albicans is a prevalent systemic fungal pathogen.
  • Genomic data for C. albicans is crucial for understanding its biology and pathogenicity.
  • Existing resources may lack comprehensive, integrated genomic information.

Purpose of the Study:

  • To develop and present CandidaDB, a dedicated database for the C. albicans genome.
  • To provide researchers with tools for analyzing gene function and exploring genomic data.
  • To facilitate large-scale and specific genomic analyses of C. albicans.

Main Methods:

  • Annotation of C. albicans genome sequence data by the European Galar Fungail Consortium.
  • Utilizing the GenoList relational data schema and WWW interface for eukaryotic genomes.

Related Experiment Videos

  • Implementing tools for browsing, pattern searching, and examining allelic sequences.

    • Main Results:

    • CandidaDB Release 2.0 contains 6244 annotated entries (130 tRNA, 5917 protein-coding genes).
    • Provides tentative functional assignments and pre-run analyses for gene evaluation.
    • Includes tools for navigating individual supercontigs and allelic sequences.

    Conclusions:

    • CandidaDB offers a valuable, integrated resource for C. albicans genomic research.
    • The database facilitates efficient exploration and analysis of the C. albicans genome.
    • Accessible online, CandidaDB supports diverse research needs in fungal pathogen genomics.