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Published on: May 10, 2024
Ribonucleotide reductase M1 gene promoter activity, polymorphisms, population frequencies, and clinical relevance
Gerold Bepler1, Zhong Zheng, Ashish Gautam
1Thoracic Oncology Program, Lee Moffitt Cancer Center, 12902 Magnolia Drive, Tampa, FL 33612, USA. beplerg@moffitt.usf.edu
Abstract:
RRM1 is a gene crucial for determination of the tumor phenotype. It encodes the regulatory subunit of ribonucleotide reductase, and it is a molecular target of gemcitabine. In addition, RRM1 induces PTEN expression and inhibits cell migration, invasion, and metastasis formation. In patients with resected lung cancers, increased levels of RRM1 are highly associated with long survival. In contrast, patients on gemcitabine and cisplatin therapy for advanced disease have a poor survival if RRM1 expression is high presumably because of decreased efficacy of chemotherapy. We analyzed the RRM1 promoter for polymorphisms in an effort to develop a practical and inexpensive assay for RRM1 expression. Two single nucleotide polymorphisms, RR37 and RR524, were discovered. These polymorphisms impacted promoter activity in vitro and had different frequencies in various populations. Promoter allelotypes were highly associated with overall (P = 0.06) and disease-free (P = 0.03) patient survival. The allelotype with the highest predicted activity was associated with the best patient outcome. However, we did not find an association between allelotype and tumoral RRM1 expression. This is likely a result of the limited impact of the described promoter polymorphisms on overall in vivo gene expression. We conclude that clinical studies using RR37 and RR524 for decisions on chemotherapy are premature and that further functional studies on the RRM1 promoter are required to fully elucidate factors controlling RRM1 expression.
Insights
Investigating RRM1 gene promoter polymorphisms revealed associations with patient survival in lung cancer. However, these specific polymorphisms did not correlate with tumoral RRM1 expression levels.
Area of Science:
- Genetics and Molecular Biology
- Cancer Research
- Oncology
Background:
- The RRM1 gene encodes the regulatory subunit of ribonucleotide reductase, a key enzyme in DNA synthesis.
- RRM1 influences tumor phenotype, PTEN expression, and inhibits cancer cell migration and metastasis.
- High RRM1 expression correlates with poor survival in patients undergoing gemcitabine/cisplatin chemotherapy but good survival in resected lung cancer.
Purpose of the Study:
- To identify RRM1 promoter polymorphisms for a potential RRM1 expression assay.
- To investigate the impact of these polymorphisms on RRM1 promoter activity and patient survival.
Main Methods:
- Analysis of the RRM1 promoter for single nucleotide polymorphisms (SNPs).
- In vitro assessment of promoter activity for identified polymorphisms (RR37 and RR524).
- Correlation analysis between promoter allelotypes and patient survival data (overall and disease-free).
Main Results:
- Two SNPs, RR37 and RR524, were identified in the RRM1 promoter.
- These polymorphisms demonstrated varying promoter activity in vitro and different population frequencies.
- Promoter allelotypes showed a significant association with disease-free survival (P=0.03) and a trend with overall survival (P=0.06).
- The allelotype with higher predicted activity was linked to better patient outcomes.
- No significant association was found between allelotype and actual tumoral RRM1 expression.
Conclusions:
- RRM1 promoter polymorphisms RR37 and RR524 are associated with lung cancer patient survival.
- The identified polymorphisms have a limited impact on overall in vivo RRM1 gene expression.
- Clinical application of these polymorphisms for chemotherapy decisions is premature; further research is needed.
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