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Sample Preparation to Bioinformatics Analysis of DNA Methylation: Association Strategy for Obesity and Related Trait Studies
Published on: May 6, 2022
[Nutritional epigenomics of metabolic syndrome]
Claudine Junien1, Catherine Gallou-Kabani, Alexandre Vigé
1Inserm U.383, Génétique, chromosome et cancer, Hôpital Necker Enfants-Malades, 149, rue de Sèvres, 75743 Paris Cedex 15, France. junien@necker.fr
Abstract:
The importance of epigenetic alterations has been acknowledged in cancer for about two decades by an increasing number of molecular oncologists who contributed to deciphering the epigenetic codes and machinery and opened the road for a new generation of drugs now in clinical trials. However, the relevance of epigenetics to common diseases such as metabolic syndrome and cardiovascular disease was less conspicuous. This review focuses on converging data supporting the hypothesis that, in addition to "thrifty genotype" inheritance, individuals with metabolic syndrome (MetS)--combining disturbances in glucose and insulin metabolism, excess of predominantly abdominally distributed weight, mild dyslipidemia and hypertension, with the subsequent development of obesity, type 2 diabetes mellitus (T2D) and cardiovascular disease (CVD)--have suffered improper "epigenetic programming" during their fetal/postnatal development due to maternal inadequate nutrition and metabolic disturbances and also during their lifetime. Moreover, as seen for obesity and T2D, MetS tends to appear earlier in childhood, to be more severe from generation to generation and to affect more pregnant women. Thus, in addition to maternal effects, MetS patients may display "transgenerational effects" via the incomplete erasure of epigenetic marks endured by their parents and grandparents. We highlight the susceptibility of epigenetic mechanisms controlling gene expression to environmental influences due to their inherent malleability, emphasizing the participation of transposable elements and the potential role of imprinted genes during critical time windows in epigenetic programming, from the very beginning of development throughout life. Increasing our understanding on epigenetic patterns significance and small molecules (nutrients, drugs) that reverse epigenetic (in)activation should provide us with the means to "unlock" silenced (enhanced) genes, and to "convert" the obsolete human thrifty genotype into a "squandering" phenotype.
Insights
Epigenetic programming errors, influenced by maternal nutrition and environmental factors, contribute to metabolic syndrome (MetS). These epigenetic changes may even pass between generations, impacting disease severity and onset.
Area of Science:
- Epigenetics and Molecular Oncology
- Metabolic and Cardiovascular Disease Research
Background:
- Epigenetic alterations are well-established in cancer, leading to new drug development.
- The role of epigenetics in common diseases like metabolic syndrome (MetS) and cardiovascular disease (CVD) is increasingly recognized.
Purpose of the Study:
- To review evidence supporting the hypothesis that improper epigenetic programming contributes to MetS.
- To explore maternal and transgenerational influences on MetS development.
Main Methods:
- Review of current research on epigenetics, MetS, and related conditions.
- Analysis of factors influencing epigenetic programming, including nutrition and environmental exposures.
- Examination of the role of transposable elements and imprinted genes.
Main Results:
- MetS development is linked to epigenetic programming errors during fetal/postnatal development and throughout life.
- MetS shows trends of earlier onset, increased severity across generations, and higher prevalence in pregnant women.
- Transgenerational epigenetic effects, stemming from parental and grandparental exposures, may contribute to MetS.
Conclusions:
- Epigenetic mechanisms are susceptible to environmental influences, impacting gene expression.
- Understanding epigenetic patterns and modulators can help reverse aberrant gene activity.
- Targeting epigenetic modifications offers potential to counteract the 'thrifty genotype' and prevent MetS and associated diseases.
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