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High Throughput In Vitro Assessment of Latency Reversing Agents on HIV Transcription and Splicing
Published on: January 22, 2019
The RNA helicase DDX1 is involved in restricted HIV-1 Rev function in human astrocytes
Jianhua Fang1, Edward Acheampong, Rajnish Dave
1The Dorrance H. Hamilton Laboratories, Center for Human Virology and Biodefense, Division of Infectious Diseases and Environmental Medicine, Department of Medicine, Jefferson Medical College, Thomas Jefferson University, Philadelphia, PA 19107, USA.
Abstract:
Productive infection by human immunodeficiency virus type I (HIV-1) in the central nervous system (CNS) involves mainly macrophages and microglial cells. A frequency of less than 10% of human astrocytes is estimated to be infectable with HIV-1. Nonetheless, this relatively low percentage of infected astrocytes, but associated with a large total number of astrocytic cells in the CNS, makes human astrocytes a critical part in the analyses of potential HIV-1 reservoirs in vivo. Investigations in astrocytic cell lines and primary human fetal astrocytes revealed that limited HIV-1 replication in these cells resulted from low-level viral entry, transcription, viral protein processing, and virion maturation. Of note, a low ratio of unspliced versus spliced HIV-1-specific RNA was also investigated, as Rev appeared to act aberrantly in astrocytes, via loss of nuclear and/or nucleolar localization and diminished Rev-mediated function. Host cellular machinery enabling Rev function has become critical for elucidation of diminished Rev activity, especially for those factors leading to RNA metabolism. We have recently identified a DEAD-box protein, DDX1, as a Rev cellular co-factor and now have explored its potential importance in astrocytes. Cells were infected with HIV-1 pseudotyped with envelope glycoproteins of amphotropic murine leukemia viruses (MLV). Semi-quantitative reverse transcriptase-polymerase chain reactions (RT-PCR) for unspliced, singly-spliced, and multiply-spliced RNA clearly showed a lower ratio of unspliced/singly-spliced over multiply-spliced HIV-1-specific RNA in human astrocytes as compared to Rev-permissive, non-glial control cells. As well, the cellular localization of Rev in astrocytes was cytoplasmically dominant as compared to that of Rev-permissive, non-glial controls. This endogenous level of DDX1 expression in astrocytes was demonstrated directly to lead to a shift of Rev sub-cellular distribution dominance from nuclear and/or nucleolar to cytoplasmic, as input of exogenous DDX1 significantly altered both Rev sub-cellular localization from cytoplasmic to nuclear predominance and concomitantly increased HIV-1 viral production in these human astrocytes. We conclude that altered DDX1 expression in human astrocytes is, at least in part, responsible for the unfavorable cellular microenvironment for Rev function in these CNS-based cells. Thus, these data suggest a molecular mechanism(s) for restricted replication in astrocytes as a potential low-level site of residual HIV-1 in vivo.
Insights
Altered DDX1 expression in human astrocytes impairs Rev function, leading to restricted HIV-1 replication in the central nervous system. This identifies astrocytes as a potential low-level reservoir for HIV-1.
Area of Science:
- Neuroscience
- Virology
- Molecular Biology
Background:
- Human immunodeficiency virus type 1 (HIV-1) primarily infects macrophages and microglia in the central nervous system (CNS).
- Astrocytes, though less frequently infected (<10%), represent a significant cell population in the CNS and a potential HIV-1 reservoir.
- Limited HIV-1 replication in astrocytes is linked to issues with viral entry, transcription, protein processing, and virion maturation, with aberrant Rev function noted.
Purpose of the Study:
- To investigate the role of the DEAD-box protein DDX1, a known Rev co-factor, in regulating HIV-1 replication within human astrocytes.
- To elucidate the molecular mechanisms underlying restricted HIV-1 replication in astrocytes.
Main Methods:
- Human astrocytes and Rev-permissive non-glial control cells were infected with HIV-1.
- Semi-quantitative reverse transcriptase-polymerase chain reaction (RT-PCR) was used to analyze viral RNA splicing patterns.
- Cellular localization of Rev protein was assessed in relation to DDX1 expression levels.
Main Results:
- Human astrocytes exhibited a lower ratio of unspliced/singly-spliced to multiply-spliced HIV-1 RNA compared to control cells.
- Rev protein predominantly localized to the cytoplasm in astrocytes, unlike in control cells.
- Endogenous DDX1 levels in astrocytes shifted Rev localization to the cytoplasm; exogenous DDX1 addition promoted nuclear Rev localization and increased HIV-1 production.
Conclusions:
- Altered DDX1 expression in human astrocytes contributes to an unfavorable cellular environment for Rev function.
- This mechanism, involving DDX1 and Rev, is a key factor in the restricted HIV-1 replication observed in astrocytes.
- Astrocytes may serve as a low-level site for residual HIV-1 in vivo.
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