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Related Experiment Videos

The oligomeric T4 primase is the functional form during replication.

Jingsong Yang1, Jun Xi, Zhihao Zhuang

  • 1Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, USA.

The Journal of Biological Chemistry
|May 18, 2005
PubMed
Summary

Bacteriophage T4 primase (gp61) forms a functional hexamer, crucial for DNA replication. This oligomerization enhances priming activity and suggests a shared active site among subunits during lagging strand synthesis.

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Area of Science:

  • Molecular Biology
  • Biochemistry
  • Virology

Background:

  • DNA primases synthesize RNA primers for DNA replication initiation.
  • In bacteriophage T4, primase (gp61) interacts with helicase (gp41) to form a primosome complex.
  • The hexameric nature of helicase (gp41) raises questions about primase (gp61) oligomeric structure.

Purpose of the Study:

  • To investigate the oligomeric state of bacteriophage T4 primase (gp61) during replication.
  • To determine if gp61 forms a hexameric structure, similar to its interacting helicase (gp41).
  • To elucidate the functional significance of gp61 oligomerization in DNA replication.

Main Methods:

  • Fluorescence anisotropy was used to determine primase/single-stranded DNA binding stoichiometry.

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  • Enzyme kinetics, including measurement of the rate constant k(cat), were employed.
  • Hetero-oligomeric complementation assays using wild-type and mutant primases were performed.
  • Main Results:

    • Fluorescence anisotropy data suggested a 6:1 stoichiometry for primase binding.
    • Increased primase concentration correlated with a higher catalytic rate (k(cat)), indicating an oligomeric functional form.
    • Mixing inactive mutant primases with wild-type restored catalytic activity, confirming oligomerization and suggesting a shared active site.

    Conclusions:

    • The study provides strong evidence for the functional oligomerization of bacteriophage T4 primase (gp61).
    • gp61 likely forms a hexameric structure, contributing to efficient lagging strand DNA synthesis.
    • The findings suggest that gp61 oligomerization is essential for its enhanced priming activity.