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Screening Foodstuffs for Class 1 Integrons and Gene Cassettes
Published on: June 19, 2015
Class 1 integrons in Pseudomonas aeruginosa isolates from clinical settings in Amazon region, Brazil
Erica L Fonseca1, Verônica V Vieira, Rosângela Cipriano
1Department of Genetics, Instituto Oswaldo Cruz, FIOCRUZ, Avenida Brazil 4365, P.O. Box 926, CEP 21045-100, Rio de Janeiro, Brazil.
Abstract:
A hundred and six Pseudomonas aeruginosa isolates from clinical cases were screened using PCR for the presence of integrons and associated resistance gene cassettes. Forty-four isolates harboured class 1 integrons (41.5%), of which 29 isolates (66%) also carried gene cassettes. The aacA gene was most frequently found within class 1 integrons (69%), followed by blaOXA family genes (52%). From class 1 integron-positive strains, we detected a total of 15 isolates (34%) carrying no gene cassettes. Restriction fragment-length polymorphism analysis of the integrons variable region revealed some identical structures, as well as distinct profiles indicating heterogeneity among these cassette regions. Multiresistance was observed in 71% of isolates, nevertheless no strong correlation was observed between integron presence and multiresistance. This is the first report showing class 1 integron prevalence and gene cassette content in P. aeruginosa isolates from clinical settings in the Brazilian Amazon.
Insights
Class 1 integrons were found in 41.5% of clinical Pseudomonas aeruginosa isolates in the Brazilian Amazon. While common, integron presence showed no strong link to multidrug resistance in these bacteria.
Area of Science:
- Microbiology
- Molecular Biology
- Genetics
Background:
- Pseudomonas aeruginosa is an opportunistic pathogen frequently associated with hospital-acquired infections.
- Integrons and associated gene cassettes are key mechanisms for the dissemination of antimicrobial resistance genes.
- Understanding integron prevalence in clinical isolates is crucial for monitoring resistance trends.
Purpose of the Study:
- To investigate the prevalence of class 1 integrons and their gene cassette content in clinical Pseudomonas aeruginosa isolates from the Brazilian Amazon.
- To analyze the correlation between integron carriage and multidrug resistance in these isolates.
Main Methods:
- Polymerase Chain Reaction (PCR) was used to screen 106 clinical Pseudomonas aeruginosa isolates for class 1 integrons.
- Gene cassette presence and types (e.g., aacA, blaOXA) were identified.
- Restriction fragment-length polymorphism (RFLP) analysis was performed on integron variable regions.
- Multidrug resistance profiles were determined for all isolates.
Main Results:
- Class 1 integrons were detected in 41.5% (44/106) of the isolates.
- Among isolates with class 1 integrons, 66% (29/44) carried gene cassettes, with aacA and blaOXA family genes being the most frequent.
- A significant proportion (34%) of class 1 integron-positive strains lacked detectable gene cassettes.
- RFLP analysis revealed both conserved and heterogeneous integron structures.
- Multidrug resistance was prevalent (71%), but no strong correlation was found with the presence of class 1 integrons.
Conclusions:
- This study reports for the first time the prevalence and gene cassette content of class 1 integrons in clinical Pseudomonas aeruginosa from the Brazilian Amazon.
- The findings highlight the presence of integrons in a substantial portion of clinical isolates, alongside diverse gene cassette structures.
- The lack of a strong correlation between integron presence and multidrug resistance suggests other resistance mechanisms may be at play in this P. aeruginosa population.
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