Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Experiment Videos

Storage and retrieval of microarray data and open source microarray database software.

Gavin Sherlock1, Catherine A Ball

  • 1Department of Genetics, Stanford University Medical School, CA 94305-5120, USA. sherlock@genome.stanford.edu

Molecular Biotechnology
|July 1, 2005
PubMed
Summary
This summary is machine-generated.

Related Concept Videos

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Experimental Evolution of Yeast Reveals Trade-offs Between Early and Late Stationary Phase.

bioRxiv : the preprint server for biology·2026
Same author

Progressive coevolution of the yeast centromere and kinetochore.

Nature·2025
Same author

Adaptive genetics reveals constraints on protein structure/function by evolving E. coli under constant nutrient limitation.

BMC biology·2025
Same author

The prototypic crAssphage is a linear phage-plasmid.

Cell host & microbe·2025
Same author

Scaling DNA engineering.

Trends in biotechnology·2025
Same author

Correction: Fit-Seq2.0: An Improved Software for High-Throughput Fitness Measurements Using Pooled Competition Assays.

Journal of molecular evolution·2025
Same journal

Cloning and Functional Characterization of AhyAP-T65Lig, an ATP-Dependent DNA Ligase from Trabzonvirus AP-T65.

Molecular biotechnology·2026
Same journal

Overexpression of the ATP-Citrate Lyase Gene Enhances Ganoderic Acid Biosynthesis in Ganoderma lingzhi.

Molecular biotechnology·2026
Same journal

CRISPR/Cas9 Mediated Genome Editing for Enhancing Abiotic Stress Tolerance in Rice: An Omics Guided Perspective.

Molecular biotechnology·2026
Same journal

Functionalization of Chitosan with Silver Oxide and Berberis aristata for Bioactive Composites with In Vivo Wound Healing Evaluation.

Molecular biotechnology·2026
Same journal

Resilience in Tribolium Castaneum Through Antioxidant Priming Under Phosphine-Induced Oxidative Stress.

Molecular biotechnology·2026
Same journal

MicroRNA-181a-5p promotes papillary thyroid carcinoma progress via the PTEN/AKT pathway.

Molecular biotechnology·2026
See all related articles

Microarray technology generates complex data requiring robust databases. This review discusses essential database features and evaluates free alternatives for researchers managing large datasets.

Area of Science:

  • Genomics
  • Bioinformatics
  • Computational Biology

Background:

  • Microarray technology is widely used, generating large volumes of complex data.
  • Associated metadata, including gene annotations and experimental conditions, adds to data complexity.
  • Emerging data standards from journals and funding agencies necessitate robust data management solutions.

Purpose of the Study:

  • To outline desirable properties of databases for microarray data management.
  • To review and compare freely available database alternatives for researchers.

Main Methods:

  • Literature review of microarray data management challenges.
  • Analysis of features and scalability of selected free database solutions.

Main Results:

Related Experiment Videos

  • Identified key database functionalities crucial for handling complex microarray data and metadata.
  • Evaluated several open-source database options based on defined criteria.

Conclusions:

  • A robust and scalable database is essential for most microarray users.
  • Several free database alternatives offer viable solutions for managing complex genomic data.