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Identification of Novel CK2 Kinase Substrates Using a Versatile Biochemical Approach
Published on: February 21, 2019
Identification of novel extracellular signal-regulated kinase docking domain inhibitors
Chad N Hancock1, Alba Macias, Eun Kyoung Lee
1Department of Pharmaceutical Sciences, School of Pharmacy, and Molecular and Cell Biology Program, University of Maryland, Baltimore, 21201, USA.
Abstract:
The extracellular signal regulated kinase (ERK1 and ERK2) signal transduction pathways play a critical role in cell proliferation. Hyperactivation of the ERK proteins either through increased expression of membrane-bound growth factor receptors or genetic mutations of upstream proteins is thought to be involved in the pathogenesis of many human cancers. Thus, targeted inhibition of ERK signaling is viewed as a potential approach to prevent cancer cell proliferation. Currently, no specific inhibitors of the ERK proteins exist. Moreover, most kinase inhibitors lack specificity because they target the ATP binding region, which is well conserved among the protein kinase families. Taking advantage of recently identified ERK docking domains, which are reported to facilitate substrate protein interactions, we have used computer-aided drug design (CADD) to identify novel small molecular weight ERK inhibitors. Following a CADD screen of over 800 000 molecules, 80 potential compounds were selected and tested for activity in biological assays. Several compounds inhibited ERK-specific phosphorylation of ribosomal S6 kinase-1 (Rsk-1) or the ternary complex factor Elk-1 (TCF/Elk-1), both of which are involved in promoting cell proliferation. Active compounds showed a dose-dependent reduction in the proliferation of several cancer cell lines as measured by colony survival assays. Direct binding between the active compounds and ERK2 was indicated by fluorescence quenching. These active compounds may serve as lead candidates for development of novel specific inhibitors of ERK-substrate interactions involved in cell proliferation.
Insights
Novel computer-aided drug design identified specific ERK inhibitors targeting docking domains. These compounds effectively reduced cancer cell proliferation by inhibiting ERK-substrate interactions, offering potential for new cancer therapies.
Area of Science:
- Biochemistry
- Molecular Biology
- Cancer Research
Background:
- Extracellular signal-regulated kinase (ERK1 and ERK2) pathways are crucial for cell proliferation.
- Hyperactivated ERK signaling is implicated in human cancer pathogenesis.
- Current kinase inhibitors lack specificity due to targeting conserved ATP-binding regions.
Purpose of the Study:
- To identify novel, specific small molecule inhibitors of ERK signaling.
- To target ERK docking domains for substrate interaction inhibition.
- To develop potential anti-cancer therapeutics by inhibiting ERK-driven proliferation.
Main Methods:
- Computer-aided drug design (CADD) screening of over 800,000 molecules.
- Biological assays to test ERK-specific phosphorylation of Rsk-1 and TCF/Elk-1.
- Colony survival assays to measure cancer cell proliferation.
- Fluorescence quenching to confirm direct binding to ERK2.
Main Results:
- Identified several compounds inhibiting ERK-specific phosphorylation of Rsk-1 and TCF/Elk-1.
- Active compounds demonstrated dose-dependent reduction in cancer cell line proliferation.
- Confirmed direct binding of active compounds to ERK2.
Conclusions:
- Novel ERK inhibitors targeting docking domains were successfully identified using CADD.
- These compounds show potential for developing specific inhibitors of ERK-substrate interactions.
- Lead candidates may pave the way for new cancer proliferation prevention strategies.
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