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Updated: Aug 16, 2026

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Split-and-pool Synthesis and Characterization of Peptide Tertiary Amide Library
Published on: June 20, 2014
One-bead-one-compound library of end-capped dipeptides and deconvolution by microflow NMR
Rozalyn A Simon1, Laura Schuresko, Nagamani Dendukuri
1Department of Chemistry and Biochemistry, University of California, Santa Cruz, 1156 High Street, Santa Cruz, CA 95064, USA.
Journal of Combinatorial Chemistry
|September 13, 2005
Summary
Researchers synthesized a diverse library of 1500 end-capped dipeptides for biological screening. Novel decoding methods using mass spectrometry and microflow NMR spectroscopy simplify compound identification from bead-based libraries.
Area of Science:
- Medicinal Chemistry
- Chemical Biology
- Drug Discovery
Background:
- Developing novel small molecules with biological activity is crucial for advancing therapeutic research.
- Traditional methods for library synthesis and decoding can be complex and time-consuming.
Purpose of the Study:
- To design and synthesize a diverse library of end-capped dipeptides for biological screening.
- To develop an efficient method for decoding one-bead-one-compound libraries.
Main Methods:
- A library of approximately 1500 end-capped dipeptides was synthesized manually on polystyrene beads using the mix-and-split method.
- Compounds were cleaved into 384-well plates for high-throughput screening.
- Individual compounds were decoded using mass spectrometry and microflow NMR spectroscopy.
Main Results:
- A diverse library of end-capped dipeptides was successfully synthesized and prepared for screening.
- A novel decoding strategy combining mass spectrometry and microflow NMR spectroscopy was implemented.
- This approach simplifies the deconvolution of one-bead-one-compound libraries, eliminating the need for complex encoding strategies.
Conclusions:
- The developed method provides an efficient way to synthesize and decode diverse chemical libraries.
- This approach facilitates the identification of novel small molecules with potential biological activity.
- The simplified decoding strategy enhances the utility of bead-based combinatorial chemistry for drug discovery.

