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Updated: Aug 10, 2026

Analysis of Cell Cycle Position in Mammalian Cells
Published on: January 21, 2012
Dissection of CDK4-binding and transactivation activities of p34(SEI-1) and comparison between functions of
Junan Li1, Peter Muscarella, Sang Hoon Joo
1Department of Surgery, College of Medicine, The Ohio State University, Columbus, Ohio 43210, USA. li.225@osu.edu
Abstract:
Recent studies showed that p34(SEI-1), also known as TRIP-Br1 or SEI-1, plays a dual role in the regulation of cell-cycle progression. It exhibits the transactivation activity and regulates a number of genes required for G1/S transition, while it also binds and activates cyclin-dependent kinase 4 (CDK4) independent of the inhibitory activity of p16. The goals of this paper are to further dissect the two roles and to compare the functions between SEI-1 and p16. (i) Yeast one-hybrid-based random mutagenesis was first used to identify a number of SEI-1 residues important for LexA-mediated transactivation, including residues L51, K52, L53, H54, L57, and L69 located within the heptad repeat (residues 30-88), a domain required for LexA-mediated transactivation, and two residues M219 and L228 at the C-terminal segment that contributes to transactivation through modulating the heptad repeat. (ii) The functional significance of these residues was further confirmed by site-directed mutagenesis. It was also shown that the heptad repeat-involving transactivation is distinct from the well-known acidic region-involving transactivation. (iii) Yeast two-hybrid-based binding analysis was made possible with the transactivation-negative SEI-1 mutants, and the results showed that some of such mutants retain full ability to bind and activate CDK4. (iv) Site-specific mutants of CDK4 were used to show that there are notable differences among SEI-1, p16, and cyclin D2 in binding to CDK4. (v) The expression levels of SEI-1 and p16 were compared in 32 tumor specimens of human squamous cell carcinomas of the head and neck. The results indicate that SEI-1 was consistently overexpressed, while p16 was consistently underexpressed. These results provide important information on the molecular mechanism of the functions of SEI-1 and on the comparison between SEI-1 and p16 at both molecular and cellular levels.
Insights
SEI-1 regulates cell cycle progression through transactivation and CDK4 activation. Researchers identified key SEI-1 residues for these functions and found SEI-1 overexpressed in head and neck cancers, unlike p16.
Area of Science:
- Molecular Biology
- Cell Biology
- Cancer Research
Background:
- SEI-1 (also known as TRIP-Br1) is a protein involved in cell cycle regulation.
- It possesses dual roles: transactivation of genes for G1/S transition and activation of cyclin-dependent kinase 4 (CDK4).
Purpose of the Study:
- To dissect the dual roles of SEI-1 in cell cycle regulation.
- To compare the functions of SEI-1 with those of p16.
- To identify key residues in SEI-1 responsible for its transactivation and CDK4 binding activities.
Main Methods:
- Yeast one-hybrid and site-directed mutagenesis to identify critical SEI-1 residues for transactivation.
- Yeast two-hybrid analysis to assess SEI-1 binding and activation of CDK4 using transactivation-negative mutants.
- Analysis of site-specific CDK4 mutants to compare binding affinities with SEI-1, p16, and cyclin D2.
- Expression level comparison of SEI-1 and p16 in human squamous cell carcinomas of the head and neck.
Main Results:
- Specific SEI-1 residues within the heptad repeat and C-terminal segments were identified as crucial for transactivation.
- Transactivation mediated by the heptad repeat is distinct from acidic region-mediated transactivation.
- Certain SEI-1 mutants lacking transactivation ability retained full capacity to bind and activate CDK4.
- Differences were observed in the binding of SEI-1, p16, and cyclin D2 to CDK4.
- SEI-1 was consistently overexpressed, while p16 was consistently underexpressed in head and neck squamous cell carcinomas.
Conclusions:
- SEI-1 exhibits distinct functional domains for transactivation and CDK4 activation.
- The study elucidates the molecular mechanisms underlying SEI-1's functions and its differential expression compared to p16 in cancer.
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