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Updated: Aug 15, 2026

A Guide to Production, Crystallization, and Structure Determination of Human IKK1/α
Published on: November 2, 2018
Crystal structure of the FERM domain of focal adhesion kinase
Derek F J Ceccarelli1, Hyun Kyu Song, Florence Poy
1Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, Massachusetts 02115, USA.
Abstract:
Focal adhesion kinase (FAK) is a non-receptor tyrosine kinase that localizes to focal adhesions in adherent cells. Through phosphorylation of proteins assembled at the cytoplasmic tails of integrins, FAK promotes signaling events that modulate cellular growth, survival, and migration. The amino-terminal region of FAK contains a region of sequence homology with band 4.1 and ezrin/radixin/moesin (ERM) proteins termed a FERM domain. FERM domains are found in a variety of signaling and cytoskeletal proteins and are thought to mediate intermolecular interactions with partner proteins and phospholipids at the plasma membrane and intramolecular regulatory interactions. Here we report two crystal structures of an NH2-terminal fragment of avian FAK containing the FERM domain and a portion of the regulatory linker that connects the FERM and kinase domains. The tertiary folds of the three subdomains (F1, F2, and F3) are similar to those of known FERM structures despite low sequence conservation. Differences in the sequence and relative orientation of the F3 subdomain alters the nature of the interdomain interface, and the phosphoinositide binding site found in ERM family FERM domains is not present in FAK. A putative protein interaction site on the F3 lobe is masked by the proximal region of the linker. Additionally, in one structure the adjacent Src SH3 and SH2 binding sites in the linker associate with the surfaces of the F3 and F1 lobes, respectively. These structural features suggest the possibility that protein interactions of the FAK FERM domain can be regulated by binding of Src kinases to the linker segment.
Insights
Focal adhesion kinase (FAK) FERM domain structures reveal unique features. These findings suggest that Src kinase binding to the FAK linker may regulate protein interactions.
Area of Science:
- Biochemistry
- Cell Biology
- Structural Biology
Background:
- Focal adhesion kinase (FAK) is a non-receptor tyrosine kinase crucial for cellular processes like growth, survival, and migration.
- FAK's N-terminal region contains a FERM domain, known for mediating protein and phospholipid interactions at the plasma membrane.
Purpose of the Study:
- To determine the crystal structures of an avian FAK FERM domain fragment.
- To investigate the structural basis for FAK FERM domain interactions and regulation.
Main Methods:
- X-ray crystallography was used to obtain two crystal structures of an N-terminal avian FAK fragment.
- Structural analysis focused on the FERM domain and the linker region connecting it to the kinase domain.
Main Results:
- The FAK FERM domain tertiary structure shows homology to other FERM domains, but with distinct features.
- Unlike ERM proteins, FAK lacks a phosphoinositide binding site in its FERM domain.
- The linker region's interaction with the FERM domain lobes suggests potential regulation by Src kinase binding.
Conclusions:
- The FAK FERM domain possesses unique structural characteristics compared to other FERM domains.
- The FAK FERM domain's protein interaction capabilities may be modulated by Src kinase binding to its linker segment.
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