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Updated: Jul 16, 2026

MicroRNA-based Regulation of Picornavirus Tropism
Published on: February 6, 2017
Methylated nucleotides block 5' terminus of HeLa cell messenger RNA
Abstract:
Polyadenylylated [poly(A)+] mRNA from HeLa cells that were labeled with [3H-methyl]-methionine and 14C-uridine was isolated by poly(U)-Sepharose chromatography. The presence of approximately two methyl groups per 1000 nucleotides of poly(A)+ RNA was calculated from the 3H/14C ratios and known degrees of methylation of 18S and 28S ribosomal RNAs. All four 2'-O-methylribonucleosides, but only two base-methylated derivatives, 7-methylguanosine (7MeG) and 6-methyladenosine (6MeA), were identified. 6MeA was the major component accounting for approximately 50% of the total methyl-labeled ribonucleosides. 7MeG, comprising about 10% of the total, was present exclusively at the 5' terminus of the poly(A)+ RNA and could be removed by periodate oxidation and beta elimination. Evidence for a 5' to 5' linkage of 7MeG to adjacent 2'-O-methylribonucleosides through at least two and probably three phosphates to give structures of the type 7MeG5'ppp5pNMep- and 7MeG5'ppp5'NMepNmep- was presented. The previous finding of similar sequences of methylated nucleotides in mRNA synthesized in vitro by enzymes associated with virus cores indicates that blocked 5' termini may be a characteristic feature of mRNAs that function in eucaryotic cells.
Insights
HeLa cell messenger RNA (mRNA) contains methylated bases, with 6-methyladenosine being the most abundant. A unique 7-methylguanosine cap structure at the 5' terminus of mRNA may be crucial for eukaryotic cell function.
Area of Science:
- Molecular Biology
- Biochemistry
- Eukaryotic Gene Expression
Background:
- Polyadenylylated [poly(A)+] mRNA plays a critical role in gene expression.
- Understanding mRNA modifications, such as methylation, is essential for deciphering gene regulation.
Purpose of the Study:
- To investigate the types and locations of methylated nucleosides in poly(A)+ mRNA from HeLa cells.
- To characterize the 5' terminal structure of eukaryotic mRNA.
Main Methods:
- Isolation of poly(A)+ RNA using poly(U)-Sepharose chromatography.
- Quantification of methylation levels using radiolabeling ([3H-methyl]-methionine and 14C-uridine) and 3H/14C ratios.
- Identification of methylated nucleosides via chromatographic and chemical analyses.
Main Results:
- Poly(A)+ RNA contains approximately two methyl groups per 1000 nucleotides.
- Identified four 2'-O-methylribonucleosides and two base-methylated derivatives: 6-methyladenosine (6MeA) and 7-methylguanosine (7MeG).
- 6MeA constituted ~50% of methylated ribonucleosides; 7MeG (~10%) was exclusively at the 5' terminus, forming a cap structure (7MeGpppNmepNmep-).
Conclusions:
- Eukaryotic mRNA possesses a methylated 5' cap structure, primarily 7-methylguanosine.
- This blocked 5' terminus is likely a characteristic feature of functional eukaryotic mRNAs.
- The findings suggest conserved mechanisms for mRNA processing and translation initiation across eukaryotes.
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